Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 TRMT12-201ENST00000328599 2207 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
RIMBP3Q9UFD9 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC19.96■□□□□ 0.79
RIMBP3Q9UFD9 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
RIMBP3Q9UFD9 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RIMBP3Q9UFD9 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RIMBP3Q9UFD9 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RIMBP3Q9UFD9 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
RIMBP3Q9UFD9 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RIMBP3Q9UFD9 LSM8-201ENST00000249299 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RIMBP3Q9UFD9 ZNF683-202ENST00000403843 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RIMBP3Q9UFD9 AC022113.1-201ENST00000499131 1674 ntTSL 2 BASIC19.95■□□□□ 0.78
RIMBP3Q9UFD9 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC19.95■□□□□ 0.78
RIMBP3Q9UFD9 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RIMBP3Q9UFD9 AC069285.1-201ENST00000450891 419 ntTSL 3 BASIC19.95■□□□□ 0.78
RIMBP3Q9UFD9 LINC01231-201ENST00000452746 886 ntTSL 3 BASIC19.95■□□□□ 0.78
RIMBP3Q9UFD9 AP006437.2-201ENST00000528000 345 ntTSL 3 BASIC19.95■□□□□ 0.78
RIMBP3Q9UFD9 AC007376.1-201ENST00000557720 604 ntBASIC19.95■□□□□ 0.78
RIMBP3Q9UFD9 AC092338.1-201ENST00000566764 423 ntTSL 5 BASIC19.95■□□□□ 0.78
RIMBP3Q9UFD9 AC148477.7-201ENST00000623871 428 ntBASIC19.95■□□□□ 0.78
RIMBP3Q9UFD9 AC090952.2-201ENST00000635800 1620 ntTSL 5 BASIC19.95■□□□□ 0.78
RIMBP3Q9UFD9 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
RIMBP3Q9UFD9 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RIMBP3Q9UFD9 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RIMBP3Q9UFD9 MANEA-AS1-201ENST00000564541 2268 ntBASIC19.95■□□□□ 0.78
RIMBP3Q9UFD9 AL445250.1-201ENST00000641671 2259 ntBASIC19.95■□□□□ 0.78
RIMBP3Q9UFD9 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
RIMBP3Q9UFD9 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.95■□□□□ 0.78
RIMBP3Q9UFD9 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.95■□□□□ 0.78
RIMBP3Q9UFD9 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC19.95■□□□□ 0.78
RIMBP3Q9UFD9 B3GALT5-AS1-201ENST00000329618 1357 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RIMBP3Q9UFD9 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
RIMBP3Q9UFD9 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RIMBP3Q9UFD9 ZNF805-202ENST00000414468 1884 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
RIMBP3Q9UFD9 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC19.95■□□□□ 0.78
RIMBP3Q9UFD9 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RIMBP3Q9UFD9 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
RIMBP3Q9UFD9 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RIMBP3Q9UFD9 RNF167-207ENST00000572430 1511 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
RIMBP3Q9UFD9 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RIMBP3Q9UFD9 NR4A1-201ENST00000243050 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RIMBP3Q9UFD9 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RIMBP3Q9UFD9 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RIMBP3Q9UFD9 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RIMBP3Q9UFD9 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
RIMBP3Q9UFD9 IL6-205ENST00000406575 649 ntTSL 2 BASIC19.94■□□□□ 0.78
RIMBP3Q9UFD9 YRDCP2-201ENST00000424606 642 ntBASIC19.94■□□□□ 0.78
RIMBP3Q9UFD9 TBC1D3P7-201ENST00000428328 914 ntBASIC19.94■□□□□ 0.78
RIMBP3Q9UFD9 AC108472.1-201ENST00000447277 618 ntTSL 3 BASIC19.94■□□□□ 0.78
RIMBP3Q9UFD9 AL031597.1-201ENST00000447383 432 ntBASIC19.94■□□□□ 0.78
RIMBP3Q9UFD9 AL513366.1-201ENST00000456427 1248 ntBASIC19.94■□□□□ 0.78
RIMBP3Q9UFD9 RNF4-212ENST00000509258 893 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RIMBP3Q9UFD9 ARF1P3-201ENST00000520038 511 ntBASIC19.94■□□□□ 0.78
RIMBP3Q9UFD9 AC090559.1-202ENST00000532943 851 ntTSL 3 BASIC19.94■□□□□ 0.78
RIMBP3Q9UFD9 FAM19A2-214ENST00000551449 580 ntTSL 4 BASIC19.94■□□□□ 0.78
RIMBP3Q9UFD9 AL137779.3-201ENST00000553295 729 ntBASIC19.94■□□□□ 0.78
RIMBP3Q9UFD9 AC040977.2-201ENST00000572547 498 ntTSL 3 BASIC19.94■□□□□ 0.78
RIMBP3Q9UFD9 AC015563.1-201ENST00000581134 468 ntTSL 3 BASIC19.94■□□□□ 0.78
RIMBP3Q9UFD9 TMED1-204ENST00000588289 541 ntTSL 2 BASIC19.94■□□□□ 0.78
RIMBP3Q9UFD9 AC092611.3-201ENST00000624858 718 ntBASIC19.94■□□□□ 0.78
RIMBP3Q9UFD9 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RIMBP3Q9UFD9 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RIMBP3Q9UFD9 DRD3-204ENST00000467632 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
RIMBP3Q9UFD9 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC19.94■□□□□ 0.78
RIMBP3Q9UFD9 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RIMBP3Q9UFD9 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RIMBP3Q9UFD9 DDC-213ENST00000617822 1809 ntTSL 3 BASIC19.94■□□□□ 0.78
RIMBP3Q9UFD9 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RIMBP3Q9UFD9 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RIMBP3Q9UFD9 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
RIMBP3Q9UFD9 OS9-204ENST00000389146 2091 ntTSL 2 BASIC19.94■□□□□ 0.78
RIMBP3Q9UFD9 CEP57-210ENST00000538658 2084 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RIMBP3Q9UFD9 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RIMBP3Q9UFD9 PRAMEF28P-201ENST00000610289 1450 ntBASIC19.94■□□□□ 0.78
RIMBP3Q9UFD9 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
RIMBP3Q9UFD9 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC19.94■□□□□ 0.78
RIMBP3Q9UFD9 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RIMBP3Q9UFD9 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
RIMBP3Q9UFD9 APOL2-203ENST00000451256 1421 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
RIMBP3Q9UFD9 ANGEL1-205ENST00000557179 1427 ntTSL 2 BASIC19.94■□□□□ 0.78
RIMBP3Q9UFD9 HLA-DQA1-202ENST00000374949 1060 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
RIMBP3Q9UFD9 AC016956.1-201ENST00000393026 1108 ntBASIC19.94■□□□□ 0.78
RIMBP3Q9UFD9 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RIMBP3Q9UFD9 OR7E31P-201ENST00000426212 886 ntBASIC19.94■□□□□ 0.78
RIMBP3Q9UFD9 AL596087.2-201ENST00000451784 484 ntTSL 3 BASIC19.94■□□□□ 0.78
RIMBP3Q9UFD9 PIK3CDP1-201ENST00000454229 922 ntBASIC19.94■□□□□ 0.78
RIMBP3Q9UFD9 RN7SL60P-201ENST00000476209 299 ntBASIC19.94■□□□□ 0.78
RIMBP3Q9UFD9 AC067819.1-201ENST00000583846 154 ntBASIC19.94■□□□□ 0.78
RIMBP3Q9UFD9 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RIMBP3Q9UFD9 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RIMBP3Q9UFD9 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RIMBP3Q9UFD9 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC19.93■□□□□ 0.78
RIMBP3Q9UFD9 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RIMBP3Q9UFD9 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RIMBP3Q9UFD9 LINC00642-201ENST00000419459 2026 ntTSL 2 BASIC19.93■□□□□ 0.78
RIMBP3Q9UFD9 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RIMBP3Q9UFD9 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
RIMBP3Q9UFD9 TM2D3-202ENST00000347970 1329 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RIMBP3Q9UFD9 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
RIMBP3Q9UFD9 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RIMBP3Q9UFD9 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms