Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 CPA5-203ENST00000461828 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMG20BQ9P0W2 DDX19B-208ENST00000563392 1760 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HMG20BQ9P0W2 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HMG20BQ9P0W2 SERPING1-202ENST00000340687 1719 ntTSL 5 BASIC16.31■□□□□ 0.2
HMG20BQ9P0W2 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMG20BQ9P0W2 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC16.31■□□□□ 0.2
HMG20BQ9P0W2 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HMG20BQ9P0W2 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
HMG20BQ9P0W2 MMD2-203ENST00000406755 2372 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HMG20BQ9P0W2 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HMG20BQ9P0W2 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
HMG20BQ9P0W2 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HMG20BQ9P0W2 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HMG20BQ9P0W2 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
HMG20BQ9P0W2 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HMG20BQ9P0W2 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC16.3■□□□□ 0.2
HMG20BQ9P0W2 OR2V2-201ENST00000328275 948 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
HMG20BQ9P0W2 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HMG20BQ9P0W2 AC092570.1-201ENST00000414446 469 ntBASIC16.3■□□□□ 0.2
HMG20BQ9P0W2 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC16.3■□□□□ 0.2
HMG20BQ9P0W2 IFNWP2-201ENST00000431203 580 ntBASIC16.3■□□□□ 0.2
HMG20BQ9P0W2 AC133141.1-201ENST00000443015 339 ntBASIC16.3■□□□□ 0.2
HMG20BQ9P0W2 AC015818.1-201ENST00000451011 244 ntBASIC16.3■□□□□ 0.2
HMG20BQ9P0W2 AC022201.1-201ENST00000452525 577 ntTSL 4 BASIC16.3■□□□□ 0.2
HMG20BQ9P0W2 AC092896.1-201ENST00000465850 380 ntBASIC16.3■□□□□ 0.2
HMG20BQ9P0W2 RBM4-207ENST00000506523 654 ntTSL 3 BASIC16.3■□□□□ 0.2
HMG20BQ9P0W2 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC16.3■□□□□ 0.2
HMG20BQ9P0W2 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC16.3■□□□□ 0.2
HMG20BQ9P0W2 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HMG20BQ9P0W2 KRT8P34-201ENST00000577607 1044 ntBASIC16.3■□□□□ 0.2
HMG20BQ9P0W2 RN7SL162P-201ENST00000579233 292 ntBASIC16.3■□□□□ 0.2
HMG20BQ9P0W2 RN7SL596P-201ENST00000582123 288 ntBASIC16.3■□□□□ 0.2
HMG20BQ9P0W2 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC16.3■□□□□ 0.2
HMG20BQ9P0W2 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC16.3■□□□□ 0.2
HMG20BQ9P0W2 AC211476.2-201ENST00000608799 708 ntBASIC16.3■□□□□ 0.2
HMG20BQ9P0W2 BX322534.1-201ENST00000635574 241 ntBASIC16.3■□□□□ 0.2
HMG20BQ9P0W2 AC215524.1-201ENST00000635696 241 ntBASIC16.3■□□□□ 0.2
HMG20BQ9P0W2 ALDOA-229ENST00000636698 420 ntTSL 3 BASIC16.3■□□□□ 0.2
HMG20BQ9P0W2 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HMG20BQ9P0W2 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
HMG20BQ9P0W2 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HMG20BQ9P0W2 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC16.3■□□□□ 0.2
HMG20BQ9P0W2 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HMG20BQ9P0W2 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HMG20BQ9P0W2 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HMG20BQ9P0W2 PRR3-201ENST00000376557 1797 ntTSL 2 BASIC16.3■□□□□ 0.2
HMG20BQ9P0W2 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HMG20BQ9P0W2 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC16.3■□□□□ 0.2
HMG20BQ9P0W2 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HMG20BQ9P0W2 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HMG20BQ9P0W2 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HMG20BQ9P0W2 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HMG20BQ9P0W2 AC107918.4-201ENST00000641966 3141 ntBASIC16.3■□□□□ 0.2
HMG20BQ9P0W2 AL591806.3-201ENST00000289779 2096 ntAPPRIS P5 TSL 2 BASIC16.3■□□□□ 0.2
HMG20BQ9P0W2 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMG20BQ9P0W2 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMG20BQ9P0W2 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC16.29■□□□□ 0.2
HMG20BQ9P0W2 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMG20BQ9P0W2 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMG20BQ9P0W2 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
HMG20BQ9P0W2 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC16.29■□□□□ 0.2
HMG20BQ9P0W2 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMG20BQ9P0W2 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMG20BQ9P0W2 PSG8-AS1-201ENST00000425668 1873 ntTSL 2 BASIC16.29■□□□□ 0.2
HMG20BQ9P0W2 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMG20BQ9P0W2 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC16.29■□□□□ 0.2
HMG20BQ9P0W2 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMG20BQ9P0W2 ELMOD3-201ENST00000315658 2685 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HMG20BQ9P0W2 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMG20BQ9P0W2 OR8J1-202ENST00000533152 1320 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
HMG20BQ9P0W2 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HMG20BQ9P0W2 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
HMG20BQ9P0W2 GZMB-201ENST00000216341 968 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMG20BQ9P0W2 ZMAT5-201ENST00000344318 899 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMG20BQ9P0W2 SLC35B3-201ENST00000379660 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMG20BQ9P0W2 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC16.29■□□□□ 0.2
HMG20BQ9P0W2 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC16.29■□□□□ 0.2
HMG20BQ9P0W2 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
HMG20BQ9P0W2 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HMG20BQ9P0W2 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC16.29■□□□□ 0.2
HMG20BQ9P0W2 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC16.29■□□□□ 0.2
HMG20BQ9P0W2 BCL2L12P1-201ENST00000508390 733 ntBASIC16.29■□□□□ 0.2
HMG20BQ9P0W2 OR4A49P-201ENST00000527050 632 ntBASIC16.29■□□□□ 0.2
HMG20BQ9P0W2 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC16.29■□□□□ 0.2
HMG20BQ9P0W2 ETV2-207ENST00000619399 994 ntTSL 5 BASIC16.29■□□□□ 0.2
HMG20BQ9P0W2 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMG20BQ9P0W2 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC16.29■□□□□ 0.2
HMG20BQ9P0W2 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC16.29■□□□□ 0.2
HMG20BQ9P0W2 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HMG20BQ9P0W2 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMG20BQ9P0W2 LAS1L-202ENST00000374807 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMG20BQ9P0W2 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC16.29■□□□□ 0.2
HMG20BQ9P0W2 CHMP4C-201ENST00000297265 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMG20BQ9P0W2 NDUFAF6-201ENST00000396111 1869 ntTSL 5 BASIC16.29■□□□□ 0.2
HMG20BQ9P0W2 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC16.29■□□□□ 0.2
HMG20BQ9P0W2 MKL1-212ENST00000618417 1842 ntTSL 5 BASIC16.29■□□□□ 0.2
HMG20BQ9P0W2 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HMG20BQ9P0W2 ACER1-201ENST00000301452 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMG20BQ9P0W2 AC011477.7-201ENST00000617163 1440 ntBASIC16.28■□□□□ 0.2
HMG20BQ9P0W2 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms