Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
PARPBPQ9NWS1 TMCO5B-205ENST00000530020 894 ntBASIC12.15□□□□□ -0.46
PARPBPQ9NWS1 SAA2-206ENST00000530400 323 ntTSL 3 BASIC12.15□□□□□ -0.46
PARPBPQ9NWS1 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC12.15□□□□□ -0.46
PARPBPQ9NWS1 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC12.15□□□□□ -0.46
PARPBPQ9NWS1 AC005777.1-201ENST00000588332 187 ntBASIC12.15□□□□□ -0.46
PARPBPQ9NWS1 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC12.15□□□□□ -0.46
PARPBPQ9NWS1 AC073911.3-201ENST00000624401 631 ntBASIC12.15□□□□□ -0.46
PARPBPQ9NWS1 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC12.15□□□□□ -0.46
PARPBPQ9NWS1 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
PARPBPQ9NWS1 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PARPBPQ9NWS1 F2-205ENST00000530231 1849 ntTSL 5 BASIC12.15□□□□□ -0.46
PARPBPQ9NWS1 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC12.15□□□□□ -0.46
PARPBPQ9NWS1 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PARPBPQ9NWS1 MAP3K9-205ENST00000554752 11169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
PARPBPQ9NWS1 RAP1GAP2-201ENST00000254695 6661 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
PARPBPQ9NWS1 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
PARPBPQ9NWS1 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
PARPBPQ9NWS1 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC12.15□□□□□ -0.46
PARPBPQ9NWS1 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC12.15□□□□□ -0.46
PARPBPQ9NWS1 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC12.15□□□□□ -0.46
PARPBPQ9NWS1 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PARPBPQ9NWS1 TIAM1-206ENST00000541036 7018 ntTSL 5 BASIC12.15□□□□□ -0.46
PARPBPQ9NWS1 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PARPBPQ9NWS1 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PARPBPQ9NWS1 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC12.15□□□□□ -0.46
PARPBPQ9NWS1 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
PARPBPQ9NWS1 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
PARPBPQ9NWS1 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PARPBPQ9NWS1 AC008040.5-201ENST00000599781 1781 ntBASIC12.15□□□□□ -0.46
PARPBPQ9NWS1 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
PARPBPQ9NWS1 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
PARPBPQ9NWS1 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
PARPBPQ9NWS1 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC12.15□□□□□ -0.47
PARPBPQ9NWS1 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC12.15□□□□□ -0.47
PARPBPQ9NWS1 NFAT5-209ENST00000567239 6376 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.47
PARPBPQ9NWS1 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
PARPBPQ9NWS1 KLB-201ENST00000257408 6082 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
PARPBPQ9NWS1 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC12.15□□□□□ -0.47
PARPBPQ9NWS1 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC12.15□□□□□ -0.47
PARPBPQ9NWS1 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
PARPBPQ9NWS1 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
PARPBPQ9NWS1 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PARPBPQ9NWS1 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
PARPBPQ9NWS1 VSTM4-202ENST00000332853 6392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
PARPBPQ9NWS1 NUP58-206ENST00000463407 6360 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
PARPBPQ9NWS1 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC12.14□□□□□ -0.47
PARPBPQ9NWS1 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC12.14□□□□□ -0.47
PARPBPQ9NWS1 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC12.14□□□□□ -0.47
PARPBPQ9NWS1 AC011700.1-201ENST00000610409 2627 ntBASIC12.14□□□□□ -0.47
PARPBPQ9NWS1 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PARPBPQ9NWS1 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
PARPBPQ9NWS1 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC12.14□□□□□ -0.47
PARPBPQ9NWS1 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
PARPBPQ9NWS1 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC12.14□□□□□ -0.47
PARPBPQ9NWS1 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PARPBPQ9NWS1 AC092115.1-201ENST00000566277 1402 ntBASIC12.14□□□□□ -0.47
PARPBPQ9NWS1 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PARPBPQ9NWS1 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC12.14□□□□□ -0.47
PARPBPQ9NWS1 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
PARPBPQ9NWS1 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC12.14□□□□□ -0.47
PARPBPQ9NWS1 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
PARPBPQ9NWS1 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
PARPBPQ9NWS1 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PARPBPQ9NWS1 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PARPBPQ9NWS1 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PARPBPQ9NWS1 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PARPBPQ9NWS1 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC12.14□□□□□ -0.47
PARPBPQ9NWS1 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC12.14□□□□□ -0.47
PARPBPQ9NWS1 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC12.14□□□□□ -0.47
PARPBPQ9NWS1 AL359979.2-201ENST00000435108 613 ntTSL 3 BASIC12.14□□□□□ -0.47
PARPBPQ9NWS1 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC12.14□□□□□ -0.47
PARPBPQ9NWS1 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC12.14□□□□□ -0.47
PARPBPQ9NWS1 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
PARPBPQ9NWS1 RN7SL8P-201ENST00000461771 266 ntBASIC12.14□□□□□ -0.47
PARPBPQ9NWS1 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC12.14□□□□□ -0.47
PARPBPQ9NWS1 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC12.14□□□□□ -0.47
PARPBPQ9NWS1 MT3-202ENST00000561640 514 ntTSL 3 BASIC12.14□□□□□ -0.47
PARPBPQ9NWS1 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC12.14□□□□□ -0.47
PARPBPQ9NWS1 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC12.14□□□□□ -0.47
PARPBPQ9NWS1 PPP2R2C-204ENST00000506140 1780 ntTSL 2 BASIC12.14□□□□□ -0.47
PARPBPQ9NWS1 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC12.14□□□□□ -0.47
PARPBPQ9NWS1 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
PARPBPQ9NWS1 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PARPBPQ9NWS1 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
PARPBPQ9NWS1 AC090502.4-201ENST00000551714 1386 ntBASIC12.14□□□□□ -0.47
PARPBPQ9NWS1 KDM2A-210ENST00000529006 6967 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PARPBPQ9NWS1 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PARPBPQ9NWS1 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
PARPBPQ9NWS1 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
PARPBPQ9NWS1 DGKZ-204ENST00000454345 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
PARPBPQ9NWS1 HEXA-201ENST00000268097 5252 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
PARPBPQ9NWS1 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC12.14□□□□□ -0.47
PARPBPQ9NWS1 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
PARPBPQ9NWS1 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC12.14□□□□□ -0.47
PARPBPQ9NWS1 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PARPBPQ9NWS1 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
PARPBPQ9NWS1 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
PARPBPQ9NWS1 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC12.14□□□□□ -0.47
PARPBPQ9NWS1 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms