Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TPM3P06753 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC15.15■□□□□ 0.02
TPM3P06753 MIR4687-201ENST00000583618 80 ntBASIC15.15■□□□□ 0.02
TPM3P06753 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TPM3P06753 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.15■□□□□ 0.02
TPM3P06753 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC15.15■□□□□ 0.02
TPM3P06753 CEACAM20-206ENST00000621342 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TPM3P06753 IGHV3-72-202ENST00000621503 303 ntBASIC15.15■□□□□ 0.02
TPM3P06753 AFG3L2P1-201ENST00000521792 1763 ntBASIC15.15■□□□□ 0.02
TPM3P06753 GPRASP1-201ENST00000361600 5971 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TPM3P06753 RPS6KA2-211ENST00000510118 5992 ntTSL 2 BASIC15.15■□□□□ 0.02
TPM3P06753 PALLD-209ENST00000507735 4379 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TPM3P06753 DRAM1-201ENST00000258534 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TPM3P06753 AC138761.6-201ENST00000583997 1423 ntBASIC15.15■□□□□ 0.02
TPM3P06753 MAST4-202ENST00000403625 10711 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TPM3P06753 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC15.15■□□□□ 0.02
TPM3P06753 TMEM185A-210ENST00000613273 1913 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TPM3P06753 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC15.15■□□□□ 0.02
TPM3P06753 ITGA2B-201ENST00000262407 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TPM3P06753 HYLS1-202ENST00000425380 2061 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
TPM3P06753 MADD-201ENST00000311027 5990 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
TPM3P06753 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TPM3P06753 MED24-204ENST00000394128 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TPM3P06753 DNAI2-201ENST00000311014 2236 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TPM3P06753 DDC-204ENST00000426377 1700 ntTSL 3 BASIC15.14■□□□□ 0.01
TPM3P06753 KRT8P43-201ENST00000406052 1458 ntBASIC15.14■□□□□ 0.01
TPM3P06753 DCAF4-203ENST00000394234 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TPM3P06753 UBTFL8-201ENST00000426903 2112 ntBASIC15.14■□□□□ 0.01
TPM3P06753 LGR6-203ENST00000367278 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TPM3P06753 ARAP1-209ENST00000455638 2683 ntTSL 5 BASIC15.14■□□□□ 0.01
TPM3P06753 CYP4F12-215ENST00000550308 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TPM3P06753 EXOC7-216ENST00000589210 4751 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TPM3P06753 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TPM3P06753 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC15.14■□□□□ 0.01
TPM3P06753 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC15.14■□□□□ 0.01
TPM3P06753 FGFR2-212ENST00000369060 3244 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TPM3P06753 MCU-204ENST00000536019 3224 ntTSL 2 BASIC15.14■□□□□ 0.01
TPM3P06753 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TPM3P06753 HMGCS1-201ENST00000325110 3506 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TPM3P06753 FER1L5-204ENST00000623019 6477 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
TPM3P06753 RNF34-203ENST00000392465 2051 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
TPM3P06753 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TPM3P06753 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
TPM3P06753 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TPM3P06753 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TPM3P06753 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC15.14■□□□□ 0.01
TPM3P06753 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TPM3P06753 RHEB-207ENST00000496004 744 ntTSL 2 BASIC15.14■□□□□ 0.01
TPM3P06753 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TPM3P06753 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC15.14■□□□□ 0.01
TPM3P06753 MIR4741-201ENST00000579822 90 ntBASIC15.14■□□□□ 0.01
TPM3P06753 MIR3188-201ENST00000583494 85 ntBASIC15.14■□□□□ 0.01
TPM3P06753 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC15.14■□□□□ 0.01
TPM3P06753 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TPM3P06753 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.14■□□□□ 0.01
TPM3P06753 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.14■□□□□ 0.01
TPM3P06753 AL022334.2-201ENST00000610000 484 ntBASIC15.14■□□□□ 0.01
TPM3P06753 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TPM3P06753 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TPM3P06753 CDH4-203ENST00000614565 6513 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TPM3P06753 MIR22HG-208ENST00000574306 2626 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TPM3P06753 SEPT9-207ENST00000449803 3996 ntTSL 2 BASIC15.14■□□□□ 0.01
TPM3P06753 FSCN3-201ENST00000265825 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TPM3P06753 SEC31A-208ENST00000448323 4255 ntAPPRIS P4 TSL 5 BASIC15.14■□□□□ 0.01
TPM3P06753 MEIS2-215ENST00000559561 1442 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
TPM3P06753 AAGAB-207ENST00000561452 2251 ntTSL 5 BASIC15.14■□□□□ 0.01
TPM3P06753 RHOH-217ENST00000610353 2268 ntAPPRIS P1 TSL 4 BASIC15.14■□□□□ 0.01
TPM3P06753 SERPING1-203ENST00000378323 1733 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
TPM3P06753 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TPM3P06753 PRRG4-201ENST00000257836 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TPM3P06753 TMPRSS13-201ENST00000430170 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TPM3P06753 HCN3-201ENST00000368358 3718 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TPM3P06753 PYGM-201ENST00000164139 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TPM3P06753 PPM1K-201ENST00000295908 1940 ntTSL 5 BASIC15.13■□□□□ 0.01
TPM3P06753 CRBN-215ENST00000639284 2223 ntTSL 5 BASIC15.13■□□□□ 0.01
TPM3P06753 NEDD4L-208ENST00000456173 4978 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TPM3P06753 ARRDC3-AS1-201ENST00000625713 2500 ntTSL 2 BASIC15.13■□□□□ 0.01
TPM3P06753 PRKAB2-201ENST00000254101 5417 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TPM3P06753 MBOAT4-201ENST00000320542 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TPM3P06753 MMP19-206ENST00000548629 1813 ntTSL 5 BASIC15.13■□□□□ 0.01
TPM3P06753 PCF11-201ENST00000298281 7677 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TPM3P06753 CHAT-202ENST00000339797 2124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TPM3P06753 CHAT-204ENST00000395559 2114 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
TPM3P06753 NPLOC4-202ENST00000374747 5538 ntTSL 2 BASIC15.13■□□□□ 0.01
TPM3P06753 TBC1D22A-203ENST00000380995 3934 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TPM3P06753 HAS3-202ENST00000306560 4220 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TPM3P06753 FAM177A1-201ENST00000280987 2927 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TPM3P06753 CELF3-202ENST00000290585 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TPM3P06753 MOCS1-204ENST00000373188 3358 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TPM3P06753 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15.13■□□□□ 0.01
TPM3P06753 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TPM3P06753 SLC22A6-202ENST00000377871 2151 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TPM3P06753 IL1R2-202ENST00000393414 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TPM3P06753 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TPM3P06753 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TPM3P06753 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC15.13■□□□□ 0.01
TPM3P06753 AC004899.1-201ENST00000424687 1714 ntBASIC15.13■□□□□ 0.01
TPM3P06753 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.13■□□□□ 0.01
TPM3P06753 ERG-211ENST00000453032 1595 ntTSL 2 BASIC15.13■□□□□ 0.01
TPM3P06753 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms