Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC12.3□□□□□ -0.44
P04436 THY1-209ENST00000580275 578 ntTSL 3 BASIC12.3□□□□□ -0.44
P04436 AP001120.3-201ENST00000585729 489 ntBASIC12.3□□□□□ -0.44
P04436 AC139713.2-207ENST00000641556 1292 ntBASIC12.3□□□□□ -0.44
P04436 DNAJC3-202ENST00000602402 5591 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P04436 UBTF-209ENST00000529383 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P04436 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P04436 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
P04436 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC12.3□□□□□ -0.44
P04436 GBAP1-208ENST00000566701 1546 ntBASIC12.3□□□□□ -0.44
P04436 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
P04436 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC12.3□□□□□ -0.44
P04436 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC12.3□□□□□ -0.44
P04436 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P04436 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
P04436 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P04436 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
P04436 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC12.3□□□□□ -0.44
P04436 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC12.3□□□□□ -0.44
P04436 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P04436 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
P04436 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
P04436 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P04436 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
P04436 EGLN3-205ENST00000547327 2849 ntBASIC12.29□□□□□ -0.44
P04436 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
P04436 LTA-213ENST00000418386 1422 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P04436 MEIS2-215ENST00000559561 1442 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
P04436 PIGB-202ENST00000539642 1668 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
P04436 RMND5B-212ENST00000542098 1681 ntTSL 5 BASIC12.29□□□□□ -0.44
P04436 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P04436 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
P04436 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
P04436 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
P04436 PTPRK-207ENST00000368226 6087 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
P04436 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC12.29□□□□□ -0.44
P04436 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
P04436 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P04436 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
P04436 MYO1D-202ENST00000394649 5451 ntTSL 5 BASIC12.29□□□□□ -0.44
P04436 L1CAM-202ENST00000361981 5004 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
P04436 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P04436 AL445250.1-201ENST00000641671 2259 ntBASIC12.29□□□□□ -0.44
P04436 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
P04436 AC073862.5-201ENST00000624129 2027 ntBASIC12.29□□□□□ -0.44
P04436 AC018904.2-201ENST00000561202 1757 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
P04436 HNRNPLP1-201ENST00000421896 1501 ntBASIC12.29□□□□□ -0.44
P04436 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
P04436 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
P04436 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
P04436 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC12.29□□□□□ -0.44
P04436 HLA-DMA-202ENST00000395303 1007 ntBASIC12.29□□□□□ -0.44
P04436 TUBB2BP1-201ENST00000404155 871 ntBASIC12.29□□□□□ -0.44
P04436 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC12.29□□□□□ -0.44
P04436 GOLGA6L16P-201ENST00000441780 1299 ntBASIC12.29□□□□□ -0.44
P04436 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC12.29□□□□□ -0.44
P04436 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC12.29□□□□□ -0.44
P04436 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC12.29□□□□□ -0.44
P04436 AC244197.1-201ENST00000456494 951 ntBASIC12.29□□□□□ -0.44
P04436 TMEM106A-201ENST00000536052 1181 ntTSL 2 BASIC12.29□□□□□ -0.44
P04436 AC079336.3-201ENST00000577227 475 ntTSL 3 BASIC12.29□□□□□ -0.44
P04436 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
P04436 HKR1-225ENST00000592168 566 ntTSL 4 BASIC12.29□□□□□ -0.44
P04436 APOC1-209ENST00000592885 562 ntTSL 3 BASIC12.29□□□□□ -0.44
P04436 KF455155.1-201ENST00000604493 303 ntBASIC12.29□□□□□ -0.44
P04436 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC12.29□□□□□ -0.44
P04436 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC12.29□□□□□ -0.44
P04436 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
P04436 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
P04436 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P04436 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P04436 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC12.29□□□□□ -0.44
P04436 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
P04436 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
P04436 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
P04436 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC12.29□□□□□ -0.44
P04436 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P04436 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
P04436 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
P04436 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC12.29□□□□□ -0.44
P04436 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P04436 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
P04436 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
P04436 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
P04436 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P04436 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC12.29□□□□□ -0.44
P04436 BIVM-ERCC5-205ENST00000639435 5632 ntAPPRIS P5 TSL 5 BASIC12.29□□□□□ -0.44
P04436 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
P04436 Z97653.2-201ENST00000623057 1418 ntBASIC12.28□□□□□ -0.44
P04436 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P04436 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC12.28□□□□□ -0.44
P04436 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
P04436 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P04436 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC12.28□□□□□ -0.44
P04436 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC12.28□□□□□ -0.44
P04436 AP000437.1-201ENST00000624057 2085 ntBASIC12.28□□□□□ -0.44
P04436 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P04436 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC12.28□□□□□ -0.44
P04436 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P04436 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms