Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AC006033.1-201ENST00000440505 426 ntBASIC14.33□□□□□ -0.12
CCDC50Q8IVM0 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC50Q8IVM0 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC14.33□□□□□ -0.12
CCDC50Q8IVM0 AP001258.2-201ENST00000529891 490 ntBASIC14.33□□□□□ -0.12
CCDC50Q8IVM0 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC14.33□□□□□ -0.12
CCDC50Q8IVM0 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CCDC50Q8IVM0 KC6-205ENST00000599934 556 ntTSL 4 BASIC14.33□□□□□ -0.12
CCDC50Q8IVM0 AL359881.2-201ENST00000602973 570 ntBASIC14.33□□□□□ -0.12
CCDC50Q8IVM0 AL109837.1-201ENST00000603272 613 ntBASIC14.33□□□□□ -0.12
CCDC50Q8IVM0 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC14.33□□□□□ -0.12
CCDC50Q8IVM0 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC14.33□□□□□ -0.12
CCDC50Q8IVM0 GARS-210ENST00000627489 324 ntTSL 4 BASIC14.33□□□□□ -0.12
CCDC50Q8IVM0 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
CCDC50Q8IVM0 PHF19-202ENST00000373896 4241 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CCDC50Q8IVM0 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CCDC50Q8IVM0 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CCDC50Q8IVM0 NPAP1-201ENST00000329468 7526 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
CCDC50Q8IVM0 BTBD3-204ENST00000405977 5137 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.12
CCDC50Q8IVM0 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC50Q8IVM0 ZNF706-209ENST00000520347 3502 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CCDC50Q8IVM0 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC50Q8IVM0 DNAJC30-201ENST00000395176 2485 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
CCDC50Q8IVM0 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC14.33□□□□□ -0.12
CCDC50Q8IVM0 HSPA8P9-201ENST00000485881 1943 ntBASIC14.33□□□□□ -0.12
CCDC50Q8IVM0 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC14.33□□□□□ -0.12
CCDC50Q8IVM0 FAM237B-201ENST00000637645 3877 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CCDC50Q8IVM0 C12orf76-205ENST00000548191 2204 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CCDC50Q8IVM0 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC50Q8IVM0 PER1-202ENST00000354903 3115 ntTSL 2 BASIC14.32□□□□□ -0.12
CCDC50Q8IVM0 TMEM56-201ENST00000370203 6822 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC50Q8IVM0 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC50Q8IVM0 SLC25A24-203ENST00000565488 4271 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC50Q8IVM0 UBTF-209ENST00000529383 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC50Q8IVM0 TMEM104-204ENST00000582330 4679 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CCDC50Q8IVM0 LINC00343-203ENST00000454555 1765 ntTSL 2 BASIC14.32□□□□□ -0.12
CCDC50Q8IVM0 MCL1-204ENST00000620947 3626 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC50Q8IVM0 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC50Q8IVM0 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC14.32□□□□□ -0.12
CCDC50Q8IVM0 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC14.32□□□□□ -0.12
CCDC50Q8IVM0 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC50Q8IVM0 CHMP4C-201ENST00000297265 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC50Q8IVM0 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC50Q8IVM0 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC50Q8IVM0 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC50Q8IVM0 ACTG1P2-201ENST00000415776 1125 ntBASIC14.32□□□□□ -0.12
CCDC50Q8IVM0 ACTG1P11-201ENST00000425411 1125 ntBASIC14.32□□□□□ -0.12
CCDC50Q8IVM0 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC14.32□□□□□ -0.12
CCDC50Q8IVM0 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC14.32□□□□□ -0.12
CCDC50Q8IVM0 RN7SL788P-201ENST00000460504 316 ntBASIC14.32□□□□□ -0.12
CCDC50Q8IVM0 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC14.32□□□□□ -0.12
CCDC50Q8IVM0 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC14.32□□□□□ -0.12
CCDC50Q8IVM0 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CCDC50Q8IVM0 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC50Q8IVM0 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
CCDC50Q8IVM0 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC14.32□□□□□ -0.12
CCDC50Q8IVM0 IRF3-215ENST00000596822 823 ntTSL 3 BASIC14.32□□□□□ -0.12
CCDC50Q8IVM0 AL049840.2-201ENST00000602722 535 ntBASIC14.32□□□□□ -0.12
CCDC50Q8IVM0 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC14.32□□□□□ -0.12
CCDC50Q8IVM0 KCNAB2-202ENST00000341524 4207 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC50Q8IVM0 KNDC1-202ENST00000368571 3925 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC50Q8IVM0 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC50Q8IVM0 TUBBP5-203ENST00000508529 1334 ntBASIC14.32□□□□□ -0.12
CCDC50Q8IVM0 OR8J1-202ENST00000533152 1320 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
CCDC50Q8IVM0 TEKT4P2-202ENST00000559466 1312 ntBASIC14.32□□□□□ -0.12
CCDC50Q8IVM0 ZMIZ1-202ENST00000446377 6686 ntTSL 5 BASIC14.32□□□□□ -0.12
CCDC50Q8IVM0 LINC00943-204ENST00000537374 1688 ntTSL 5 BASIC14.32□□□□□ -0.12
CCDC50Q8IVM0 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC50Q8IVM0 CPN2-201ENST00000323830 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC50Q8IVM0 ADD1-207ENST00000446856 3745 ntTSL 5 BASIC14.32□□□□□ -0.12
CCDC50Q8IVM0 CSF3R-201ENST00000331941 2375 ntTSL 5 BASIC14.32□□□□□ -0.12
CCDC50Q8IVM0 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC50Q8IVM0 PHF20-203ENST00000374012 5922 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC50Q8IVM0 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC50Q8IVM0 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC50Q8IVM0 GOLGA8UP-201ENST00000527159 1755 ntBASIC14.32□□□□□ -0.12
CCDC50Q8IVM0 AC009123.1-202ENST00000565643 2551 ntTSL 2 BASIC14.31□□□□□ -0.12
CCDC50Q8IVM0 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC50Q8IVM0 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
CCDC50Q8IVM0 FAM214B-205ENST00000488109 2999 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CCDC50Q8IVM0 SYMPK-201ENST00000245934 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC50Q8IVM0 HNRNPLP1-201ENST00000421896 1501 ntBASIC14.31□□□□□ -0.12
CCDC50Q8IVM0 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC50Q8IVM0 GPC4-201ENST00000370828 4960 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC50Q8IVM0 SPATA13-203ENST00000382108 8463 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CCDC50Q8IVM0 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC50Q8IVM0 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
CCDC50Q8IVM0 AL357673.2-201ENST00000623663 4969 ntTSL 5 BASIC14.31□□□□□ -0.12
CCDC50Q8IVM0 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC50Q8IVM0 CCDC14-220ENST00000488653 4156 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC50Q8IVM0 RMND5B-212ENST00000542098 1681 ntTSL 5 BASIC14.31□□□□□ -0.12
CCDC50Q8IVM0 EPHA1-201ENST00000275815 3363 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC50Q8IVM0 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
CCDC50Q8IVM0 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC14.31□□□□□ -0.12
CCDC50Q8IVM0 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC50Q8IVM0 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC50Q8IVM0 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC50Q8IVM0 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC50Q8IVM0 NME4-203ENST00000397722 1232 ntTSL 2 BASIC14.31□□□□□ -0.12
CCDC50Q8IVM0 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC14.31□□□□□ -0.12
CCDC50Q8IVM0 EEF1DP2-201ENST00000433698 843 ntBASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms