Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC15.4■□□□□ 0.06
CLCN1P35523 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC15.4■□□□□ 0.06
CLCN1P35523 SCARNA21-201ENST00000517026 139 ntBASIC15.4■□□□□ 0.06
CLCN1P35523 AC022217.1-201ENST00000521069 738 ntBASIC15.4■□□□□ 0.06
CLCN1P35523 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLCN1P35523 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLCN1P35523 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC15.4■□□□□ 0.06
CLCN1P35523 PAM16-211ENST00000575848 518 ntTSL 3 BASIC15.4■□□□□ 0.06
CLCN1P35523 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CLCN1P35523 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC15.4■□□□□ 0.06
CLCN1P35523 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC15.4■□□□□ 0.06
CLCN1P35523 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.4■□□□□ 0.06
CLCN1P35523 AC133540.1-201ENST00000620845 1019 ntBASIC15.4■□□□□ 0.06
CLCN1P35523 AC090386.2-201ENST00000623010 1039 ntBASIC15.4■□□□□ 0.06
CLCN1P35523 DDX5-235ENST00000630471 473 ntTSL 4 BASIC15.4■□□□□ 0.06
CLCN1P35523 GPR12-202ENST00000405846 4850 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLCN1P35523 NFXL1-202ENST00000381538 3728 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CLCN1P35523 GPR17-206ENST00000544369 2598 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CLCN1P35523 ZNF461-204ENST00000588268 2584 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLCN1P35523 ACLY-204ENST00000537919 2974 ntTSL 2 BASIC15.4■□□□□ 0.06
CLCN1P35523 CDH3-202ENST00000429102 3611 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLCN1P35523 ANKRD34A-201ENST00000606888 3613 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CLCN1P35523 PDK2-216ENST00000614357 2493 ntTSL 5 BASIC15.4■□□□□ 0.06
CLCN1P35523 FAM222B-209ENST00000581407 4161 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLCN1P35523 SUOX-203ENST00000394109 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLCN1P35523 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC15.4■□□□□ 0.06
CLCN1P35523 TGM3-201ENST00000381458 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLCN1P35523 SLC4A2-204ENST00000461735 4387 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLCN1P35523 STRCP1-201ENST00000509801 5328 ntBASIC15.4■□□□□ 0.06
CLCN1P35523 PGGHG-202ENST00000409479 3062 ntTSL 5 BASIC15.4■□□□□ 0.06
CLCN1P35523 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLCN1P35523 NRF1-201ENST00000223190 2424 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CLCN1P35523 GLYR1-201ENST00000321919 3772 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCN1P35523 HIRIP3-201ENST00000279392 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCN1P35523 ARHGEF9-218ENST00000624843 2154 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLCN1P35523 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCN1P35523 SLC13A2-202ENST00000444914 2855 ntTSL 2 BASIC15.39■□□□□ 0.05
CLCN1P35523 TMX1-201ENST00000457354 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCN1P35523 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLCN1P35523 GPC4-201ENST00000370828 4960 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCN1P35523 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC15.39■□□□□ 0.05
CLCN1P35523 AC004471.2-201ENST00000609936 1514 ntTSL 3 BASIC15.39■□□□□ 0.05
CLCN1P35523 CCDC163-203ENST00000626657 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCN1P35523 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCN1P35523 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC15.39■□□□□ 0.05
CLCN1P35523 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCN1P35523 TMEM246-202ENST00000374848 4244 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCN1P35523 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CLCN1P35523 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCN1P35523 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCN1P35523 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLCN1P35523 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC15.39■□□□□ 0.05
CLCN1P35523 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCN1P35523 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC15.39■□□□□ 0.05
CLCN1P35523 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC15.39■□□□□ 0.05
CLCN1P35523 Z93015.1-201ENST00000451718 390 ntBASIC15.39■□□□□ 0.05
CLCN1P35523 RNMTL1P1-201ENST00000454103 560 ntBASIC15.39■□□□□ 0.05
CLCN1P35523 RPL18P13-201ENST00000478088 569 ntBASIC15.39■□□□□ 0.05
CLCN1P35523 FAM86HP-204ENST00000513466 959 ntBASIC15.39■□□□□ 0.05
CLCN1P35523 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC15.39■□□□□ 0.05
CLCN1P35523 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC15.39■□□□□ 0.05
CLCN1P35523 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC15.39■□□□□ 0.05
CLCN1P35523 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC15.39■□□□□ 0.05
CLCN1P35523 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC15.39■□□□□ 0.05
CLCN1P35523 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC15.39■□□□□ 0.05
CLCN1P35523 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC15.39■□□□□ 0.05
CLCN1P35523 AC009118.3-201ENST00000622896 873 ntBASIC15.39■□□□□ 0.05
CLCN1P35523 PCBP2-OT1-201ENST00000634357 590 ntBASIC15.39■□□□□ 0.05
CLCN1P35523 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CLCN1P35523 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCN1P35523 SDCCAG8-201ENST00000366541 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCN1P35523 ADGRF3-202ENST00000333478 3896 ntTSL 5 BASIC15.39■□□□□ 0.05
CLCN1P35523 BCKDHA-202ENST00000457836 1745 ntTSL 2 BASIC15.39■□□□□ 0.05
CLCN1P35523 CASC4-202ENST00000345795 3764 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCN1P35523 MPPE1-202ENST00000317235 2324 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLCN1P35523 INTS9-201ENST00000416984 2759 ntTSL 2 BASIC15.39■□□□□ 0.05
CLCN1P35523 PRKG2-201ENST00000264399 4822 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CLCN1P35523 THSD1-201ENST00000258613 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCN1P35523 AL713866.1-201ENST00000563320 3125 ntBASIC15.39■□□□□ 0.05
CLCN1P35523 NEK6-212ENST00000539416 2582 ntTSL 2 BASIC15.38■□□□□ 0.05
CLCN1P35523 CYP1A1-209ENST00000612821 2402 ntTSL 5 BASIC15.38■□□□□ 0.05
CLCN1P35523 POM121L1P-202ENST00000605258 1835 ntBASIC15.38■□□□□ 0.05
CLCN1P35523 CCT8L1P-201ENST00000465400 1674 ntBASIC15.38■□□□□ 0.05
CLCN1P35523 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CLCN1P35523 FAM90A7P-201ENST00000382628 1395 ntBASIC15.38■□□□□ 0.05
CLCN1P35523 FAM90A23P-201ENST00000400136 1395 ntBASIC15.38■□□□□ 0.05
CLCN1P35523 NMT2-202ENST00000378165 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCN1P35523 AL021392.1-201ENST00000426112 2949 ntTSL 2 BASIC15.38■□□□□ 0.05
CLCN1P35523 GOLGA2P1-201ENST00000512938 2906 ntBASIC15.38■□□□□ 0.05
CLCN1P35523 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC15.38■□□□□ 0.05
CLCN1P35523 LINC01649-202ENST00000634255 1743 ntTSL 5 BASIC15.38■□□□□ 0.05
CLCN1P35523 C1S-221ENST00000617865 2844 ntTSL 5 BASIC15.38■□□□□ 0.05
CLCN1P35523 SSX2IP-201ENST00000342203 5835 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCN1P35523 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCN1P35523 LRTM1-201ENST00000273286 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCN1P35523 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC15.38■□□□□ 0.05
CLCN1P35523 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCN1P35523 PI4KB-204ENST00000368875 3983 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
CLCN1P35523 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCN1P35523 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms