Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC10□□□□□ -0.81
NACAE9PAV3 RUBCNL-208ENST00000429979 3979 ntAPPRIS P3 TSL 5 BASIC10□□□□□ -0.81
NACAE9PAV3 ZNF341-201ENST00000342427 3661 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
NACAE9PAV3 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC10□□□□□ -0.81
NACAE9PAV3 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC10□□□□□ -0.81
NACAE9PAV3 RBM15-201ENST00000369784 4244 ntTSL 1 (best) BASIC10□□□□□ -0.81
NACAE9PAV3 FAM95B1-201ENST00000455995 4236 ntTSL 2 BASIC10□□□□□ -0.81
NACAE9PAV3 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC10□□□□□ -0.81
NACAE9PAV3 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC10□□□□□ -0.81
NACAE9PAV3 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
NACAE9PAV3 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC10□□□□□ -0.81
NACAE9PAV3 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC10□□□□□ -0.81
NACAE9PAV3 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
NACAE9PAV3 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC10□□□□□ -0.81
NACAE9PAV3 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC10□□□□□ -0.81
NACAE9PAV3 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
NACAE9PAV3 EPB41L2-203ENST00000368128 4456 ntAPPRIS P3 TSL 5 BASIC10□□□□□ -0.81
NACAE9PAV3 MARCH5-201ENST00000358935 3926 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
NACAE9PAV3 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
NACAE9PAV3 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
NACAE9PAV3 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC10□□□□□ -0.81
NACAE9PAV3 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC10□□□□□ -0.81
NACAE9PAV3 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
NACAE9PAV3 MPV17-204ENST00000399052 749 ntTSL 4 BASIC10□□□□□ -0.81
NACAE9PAV3 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC10□□□□□ -0.81
NACAE9PAV3 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC10□□□□□ -0.81
NACAE9PAV3 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
NACAE9PAV3 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
NACAE9PAV3 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC10□□□□□ -0.81
NACAE9PAV3 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC10□□□□□ -0.81
NACAE9PAV3 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
NACAE9PAV3 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC10□□□□□ -0.81
NACAE9PAV3 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC10□□□□□ -0.81
NACAE9PAV3 RTN3P1-201ENST00000536295 711 ntBASIC10□□□□□ -0.81
NACAE9PAV3 KRT8P1-201ENST00000557533 1207 ntBASIC10□□□□□ -0.81
NACAE9PAV3 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC10□□□□□ -0.81
NACAE9PAV3 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC10□□□□□ -0.81
NACAE9PAV3 RPL17P45-201ENST00000586289 509 ntBASIC10□□□□□ -0.81
NACAE9PAV3 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC10□□□□□ -0.81
NACAE9PAV3 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC10□□□□□ -0.81
NACAE9PAV3 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC10□□□□□ -0.81
NACAE9PAV3 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC10□□□□□ -0.81
NACAE9PAV3 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
NACAE9PAV3 MARK2P16-201ENST00000605714 1723 ntBASIC10□□□□□ -0.81
NACAE9PAV3 NR3C2-203ENST00000358102 5893 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
NACAE9PAV3 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC10□□□□□ -0.81
NACAE9PAV3 TRAF3-201ENST00000347662 7700 ntTSL 5 BASIC10□□□□□ -0.81
NACAE9PAV3 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC10□□□□□ -0.81
NACAE9PAV3 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC10□□□□□ -0.81
NACAE9PAV3 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC10□□□□□ -0.81
NACAE9PAV3 FN1-205ENST00000357867 7898 ntTSL 1 (best) BASIC10□□□□□ -0.81
NACAE9PAV3 PAM-203ENST00000346918 3302 ntTSL 5 BASIC9.99□□□□□ -0.81
NACAE9PAV3 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
NACAE9PAV3 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
NACAE9PAV3 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC9.99□□□□□ -0.81
NACAE9PAV3 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
NACAE9PAV3 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
NACAE9PAV3 ZC2HC1C-203ENST00000524913 4283 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
NACAE9PAV3 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
NACAE9PAV3 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
NACAE9PAV3 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
NACAE9PAV3 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC9.99□□□□□ -0.81
NACAE9PAV3 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
NACAE9PAV3 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
NACAE9PAV3 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
NACAE9PAV3 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC9.99□□□□□ -0.81
NACAE9PAV3 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC9.99□□□□□ -0.81
NACAE9PAV3 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
NACAE9PAV3 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
NACAE9PAV3 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC9.99□□□□□ -0.81
NACAE9PAV3 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC9.99□□□□□ -0.81
NACAE9PAV3 PFN2-202ENST00000423691 911 ntTSL 2 BASIC9.99□□□□□ -0.81
NACAE9PAV3 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
NACAE9PAV3 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
NACAE9PAV3 KLF17P1-201ENST00000547105 1126 ntBASIC9.99□□□□□ -0.81
NACAE9PAV3 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC9.99□□□□□ -0.81
NACAE9PAV3 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC9.99□□□□□ -0.81
NACAE9PAV3 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC9.99□□□□□ -0.81
NACAE9PAV3 RN7SL163P-201ENST00000583100 276 ntBASIC9.99□□□□□ -0.81
NACAE9PAV3 CENPX-208ENST00000584347 799 ntTSL 2 BASIC9.99□□□□□ -0.81
NACAE9PAV3 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC9.99□□□□□ -0.81
NACAE9PAV3 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC9.99□□□□□ -0.81
NACAE9PAV3 NAP1L6-202ENST00000641404 1222 ntBASIC9.99□□□□□ -0.81
NACAE9PAV3 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC9.99□□□□□ -0.81
NACAE9PAV3 ARHGEF9-205ENST00000437457 3758 ntTSL 5 BASIC9.99□□□□□ -0.81
NACAE9PAV3 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
NACAE9PAV3 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
NACAE9PAV3 CYYR1-201ENST00000299340 3101 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
NACAE9PAV3 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
NACAE9PAV3 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC9.99□□□□□ -0.81
NACAE9PAV3 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
NACAE9PAV3 SEC31A-202ENST00000311785 3909 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
NACAE9PAV3 ZKSCAN1-206ENST00000620510 9192 ntTSL 5 BASIC9.99□□□□□ -0.81
NACAE9PAV3 PDIK1L-204ENST00000619836 4252 ntAPPRIS P1 TSL 3 BASIC9.99□□□□□ -0.81
NACAE9PAV3 GPR12-202ENST00000405846 4850 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
NACAE9PAV3 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
NACAE9PAV3 ABCD1P2-201ENST00000429313 1601 ntBASIC9.99□□□□□ -0.81
NACAE9PAV3 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC9.99□□□□□ -0.81
NACAE9PAV3 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
NACAE9PAV3 OTOF-203ENST00000339598 4756 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms