Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 GRP-201ENST00000256857 848 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRMT13Q9NUP7 AL031577.1-201ENST00000339867 399 ntBASIC14.63□□□□□ -0.07
TRMT13Q9NUP7 COQ4-202ENST00000372875 928 ntTSL 2 BASIC14.63□□□□□ -0.07
TRMT13Q9NUP7 PHACTR1-203ENST00000379335 943 ntTSL 2 BASIC14.63□□□□□ -0.07
TRMT13Q9NUP7 OR7E122P-201ENST00000383606 1017 ntBASIC14.63□□□□□ -0.07
TRMT13Q9NUP7 POLR3H-204ENST00000407461 802 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRMT13Q9NUP7 IL1RN-205ENST00000409930 848 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRMT13Q9NUP7 AC005822.1-201ENST00000414124 1034 ntBASIC14.63□□□□□ -0.07
TRMT13Q9NUP7 AKT3-IT1-201ENST00000417120 517 ntTSL 5 BASIC14.63□□□□□ -0.07
TRMT13Q9NUP7 LINC01693-202ENST00000430123 357 ntTSL 3 BASIC14.63□□□□□ -0.07
TRMT13Q9NUP7 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
TRMT13Q9NUP7 AC010136.1-201ENST00000450996 568 ntTSL 4 BASIC14.63□□□□□ -0.07
TRMT13Q9NUP7 AC234582.2-201ENST00000455788 568 ntTSL 3 BASIC14.63□□□□□ -0.07
TRMT13Q9NUP7 RN7SL33P-201ENST00000462543 342 ntBASIC14.63□□□□□ -0.07
TRMT13Q9NUP7 AC104117.1-201ENST00000517817 900 ntBASIC14.63□□□□□ -0.07
TRMT13Q9NUP7 SMIM22-206ENST00000589327 629 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRMT13Q9NUP7 CSH2-207ENST00000613718 666 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRMT13Q9NUP7 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRMT13Q9NUP7 FRG2EP-201ENST00000634243 835 ntBASIC14.63□□□□□ -0.07
TRMT13Q9NUP7 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRMT13Q9NUP7 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRMT13Q9NUP7 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
TRMT13Q9NUP7 TMUB2-205ENST00000587172 1598 ntTSL 2 BASIC14.63□□□□□ -0.07
TRMT13Q9NUP7 MRPL43-202ENST00000318325 2134 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRMT13Q9NUP7 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.63□□□□□ -0.07
TRMT13Q9NUP7 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRMT13Q9NUP7 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRMT13Q9NUP7 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRMT13Q9NUP7 WNT8A-202ENST00000398754 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRMT13Q9NUP7 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRMT13Q9NUP7 ITGB1BP1-201ENST00000238091 1772 ntTSL 3 BASIC14.62□□□□□ -0.07
TRMT13Q9NUP7 CPA5-203ENST00000461828 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRMT13Q9NUP7 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRMT13Q9NUP7 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.62□□□□□ -0.07
TRMT13Q9NUP7 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRMT13Q9NUP7 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRMT13Q9NUP7 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC14.62□□□□□ -0.07
TRMT13Q9NUP7 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRMT13Q9NUP7 AC097474.1-201ENST00000506481 1371 ntBASIC14.62□□□□□ -0.07
TRMT13Q9NUP7 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRMT13Q9NUP7 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.62□□□□□ -0.07
TRMT13Q9NUP7 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRMT13Q9NUP7 Z98259.1-201ENST00000564261 1697 ntBASIC14.62□□□□□ -0.07
TRMT13Q9NUP7 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
TRMT13Q9NUP7 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
TRMT13Q9NUP7 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRMT13Q9NUP7 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRMT13Q9NUP7 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRMT13Q9NUP7 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
TRMT13Q9NUP7 LAMP2-201ENST00000200639 1867 ntAPPRIS P5 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRMT13Q9NUP7 TIMP1-201ENST00000218388 892 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRMT13Q9NUP7 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRMT13Q9NUP7 SERPING1-202ENST00000340687 1719 ntTSL 5 BASIC14.62□□□□□ -0.07
TRMT13Q9NUP7 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRMT13Q9NUP7 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRMT13Q9NUP7 LINC00449-201ENST00000366259 872 ntTSL 2 BASIC14.62□□□□□ -0.07
TRMT13Q9NUP7 NPPB-201ENST00000376468 694 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRMT13Q9NUP7 TIMP1-202ENST00000377017 626 ntTSL 2 BASIC14.62□□□□□ -0.07
TRMT13Q9NUP7 FAM27E3-201ENST00000418795 1593 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRMT13Q9NUP7 TRBV11-2-201ENST00000471935 408 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRMT13Q9NUP7 RNF7-205ENST00000480908 782 ntTSL 4 BASIC14.62□□□□□ -0.07
TRMT13Q9NUP7 RPL30P11-202ENST00000509114 358 ntTSL 3 BASIC14.62□□□□□ -0.07
TRMT13Q9NUP7 AC008808.2-201ENST00000510349 569 ntTSL 3 BASIC14.62□□□□□ -0.07
TRMT13Q9NUP7 AC068858.1-201ENST00000525114 1239 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRMT13Q9NUP7 THEG-204ENST00000530711 1162 ntAPPRIS ALT2 TSL 3 BASIC14.62□□□□□ -0.07
TRMT13Q9NUP7 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
TRMT13Q9NUP7 AC140847.2-201ENST00000545923 501 ntTSL 3 BASIC14.62□□□□□ -0.07
TRMT13Q9NUP7 COX14-204ENST00000550654 580 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
TRMT13Q9NUP7 Z92544.2-202ENST00000566927 407 ntTSL 3 BASIC14.62□□□□□ -0.07
TRMT13Q9NUP7 AC012146.4-201ENST00000575546 271 ntBASIC14.62□□□□□ -0.07
TRMT13Q9NUP7 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRMT13Q9NUP7 AL031768.1-201ENST00000606542 701 ntBASIC14.62□□□□□ -0.07
TRMT13Q9NUP7 AP001043.1-206ENST00000613045 730 ntTSL 5 BASIC14.62□□□□□ -0.07
TRMT13Q9NUP7 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRMT13Q9NUP7 VOPP1-217ENST00000625836 1400 ntTSL 2 BASIC14.62□□□□□ -0.07
TRMT13Q9NUP7 Z82244.2-201ENST00000632196 448 ntBASIC14.62□□□□□ -0.07
TRMT13Q9NUP7 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRMT13Q9NUP7 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
TRMT13Q9NUP7 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
TRMT13Q9NUP7 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRMT13Q9NUP7 ZFAND1-201ENST00000220669 1798 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRMT13Q9NUP7 ZFAND1-221ENST00000523096 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRMT13Q9NUP7 AMHR2-204ENST00000550311 1787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRMT13Q9NUP7 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRMT13Q9NUP7 CLUHP8-201ENST00000547527 1485 ntBASIC14.62□□□□□ -0.07
TRMT13Q9NUP7 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRMT13Q9NUP7 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRMT13Q9NUP7 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
TRMT13Q9NUP7 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.62□□□□□ -0.07
TRMT13Q9NUP7 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRMT13Q9NUP7 RHOH-219ENST00000614836 2114 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
TRMT13Q9NUP7 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRMT13Q9NUP7 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.62□□□□□ -0.07
TRMT13Q9NUP7 RUSC1-AS1-202ENST00000446880 1836 ntTSL 2 BASIC14.62□□□□□ -0.07
TRMT13Q9NUP7 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.61□□□□□ -0.07
TRMT13Q9NUP7 SIGLEC17P-204ENST00000618545 1517 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRMT13Q9NUP7 FAHD2A-204ENST00000447036 1366 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
TRMT13Q9NUP7 AC012158.1-201ENST00000535684 1366 ntTSL 2 BASIC14.61□□□□□ -0.07
TRMT13Q9NUP7 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRMT13Q9NUP7 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms