Protein–RNA interactions for Protein: Q8NEZ2

VPS37A, Vacuolar protein sorting-associated protein 37A, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37AQ8NEZ2 GOLGA8UP-201ENST00000527159 1755 ntBASIC12.97□□□□□ -0.33
VPS37AQ8NEZ2 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VPS37AQ8NEZ2 KRT8P31-201ENST00000504812 1408 ntBASIC12.96□□□□□ -0.33
VPS37AQ8NEZ2 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VPS37AQ8NEZ2 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC12.96□□□□□ -0.33
VPS37AQ8NEZ2 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
VPS37AQ8NEZ2 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VPS37AQ8NEZ2 PAX9-202ENST00000402703 3104 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
VPS37AQ8NEZ2 EGLN3-205ENST00000547327 2849 ntBASIC12.96□□□□□ -0.33
VPS37AQ8NEZ2 ARHGEF10-203ENST00000398560 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
VPS37AQ8NEZ2 AL022238.4-201ENST00000639722 4563 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
VPS37AQ8NEZ2 TUBBP5-203ENST00000508529 1334 ntBASIC12.96□□□□□ -0.33
VPS37AQ8NEZ2 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
VPS37AQ8NEZ2 GPR39-201ENST00000329321 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VPS37AQ8NEZ2 TARS2-205ENST00000438568 2188 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
VPS37AQ8NEZ2 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VPS37AQ8NEZ2 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
VPS37AQ8NEZ2 GK-202ENST00000378941 458 ntTSL 3 BASIC12.96□□□□□ -0.33
VPS37AQ8NEZ2 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
VPS37AQ8NEZ2 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VPS37AQ8NEZ2 GGTLC4P-201ENST00000402176 664 ntBASIC12.96□□□□□ -0.33
VPS37AQ8NEZ2 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC12.96□□□□□ -0.33
VPS37AQ8NEZ2 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC12.96□□□□□ -0.33
VPS37AQ8NEZ2 RPL18AP8-201ENST00000486071 528 ntBASIC12.96□□□□□ -0.33
VPS37AQ8NEZ2 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC12.96□□□□□ -0.33
VPS37AQ8NEZ2 AP001258.2-201ENST00000529891 490 ntBASIC12.96□□□□□ -0.33
VPS37AQ8NEZ2 NOP2-220ENST00000545915 630 ntTSL 2 BASIC12.96□□□□□ -0.33
VPS37AQ8NEZ2 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC12.96□□□□□ -0.33
VPS37AQ8NEZ2 TMBIM6-227ENST00000552699 2964 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
VPS37AQ8NEZ2 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC12.96□□□□□ -0.33
VPS37AQ8NEZ2 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
VPS37AQ8NEZ2 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VPS37AQ8NEZ2 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC12.96□□□□□ -0.33
VPS37AQ8NEZ2 CCBE1-202ENST00000439986 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VPS37AQ8NEZ2 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VPS37AQ8NEZ2 FANCC-202ENST00000375305 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VPS37AQ8NEZ2 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
VPS37AQ8NEZ2 MLPH-202ENST00000338530 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
VPS37AQ8NEZ2 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
VPS37AQ8NEZ2 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
VPS37AQ8NEZ2 HOXA1-202ENST00000355633 2016 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
VPS37AQ8NEZ2 REST-208ENST00000619101 7114 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
VPS37AQ8NEZ2 ARHGAP33-203ENST00000314737 3858 ntAPPRIS P3 TSL 2 BASIC12.96□□□□□ -0.34
VPS37AQ8NEZ2 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
VPS37AQ8NEZ2 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
VPS37AQ8NEZ2 SLC26A6-204ENST00000383733 2545 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
VPS37AQ8NEZ2 TREH-202ENST00000397925 1718 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
VPS37AQ8NEZ2 COL11A1-210ENST00000512756 5442 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
VPS37AQ8NEZ2 ZNF667-201ENST00000292069 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
VPS37AQ8NEZ2 ARFGEF1-201ENST00000262215 7225 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
VPS37AQ8NEZ2 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
VPS37AQ8NEZ2 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
VPS37AQ8NEZ2 PCDHGA12-201ENST00000252085 4747 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
VPS37AQ8NEZ2 C1R-209ENST00000542285 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
VPS37AQ8NEZ2 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VPS37AQ8NEZ2 CBR4-202ENST00000504480 1602 ntTSL 2 BASIC12.95□□□□□ -0.34
VPS37AQ8NEZ2 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC12.95□□□□□ -0.34
VPS37AQ8NEZ2 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC12.95□□□□□ -0.34
VPS37AQ8NEZ2 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
VPS37AQ8NEZ2 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
VPS37AQ8NEZ2 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC12.95□□□□□ -0.34
VPS37AQ8NEZ2 VDR-202ENST00000395324 4762 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
VPS37AQ8NEZ2 MKL1-213ENST00000620651 3757 ntTSL 5 BASIC12.95□□□□□ -0.34
VPS37AQ8NEZ2 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
VPS37AQ8NEZ2 ZCCHC14-201ENST00000268616 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VPS37AQ8NEZ2 BCORL1-201ENST00000218147 6860 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
VPS37AQ8NEZ2 JDP2-203ENST00000435893 5401 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VPS37AQ8NEZ2 ZBTB44-202ENST00000397753 3951 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
VPS37AQ8NEZ2 COL4A6-209ENST00000545689 6380 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
VPS37AQ8NEZ2 TBL1X-202ENST00000380961 4674 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VPS37AQ8NEZ2 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VPS37AQ8NEZ2 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC12.95□□□□□ -0.34
VPS37AQ8NEZ2 IL12RB1-207ENST00000600835 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VPS37AQ8NEZ2 ALDH18A1-202ENST00000371224 3359 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
VPS37AQ8NEZ2 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
VPS37AQ8NEZ2 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VPS37AQ8NEZ2 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VPS37AQ8NEZ2 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
VPS37AQ8NEZ2 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
VPS37AQ8NEZ2 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
VPS37AQ8NEZ2 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
VPS37AQ8NEZ2 OR2W2P-201ENST00000406313 909 ntBASIC12.95□□□□□ -0.34
VPS37AQ8NEZ2 ISCA2P1-201ENST00000425548 448 ntBASIC12.95□□□□□ -0.34
VPS37AQ8NEZ2 AC016700.1-201ENST00000429424 312 ntBASIC12.95□□□□□ -0.34
VPS37AQ8NEZ2 EEF1DP2-201ENST00000433698 843 ntBASIC12.95□□□□□ -0.34
VPS37AQ8NEZ2 RPS2P32-201ENST00000439199 892 ntBASIC12.95□□□□□ -0.34
VPS37AQ8NEZ2 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC12.95□□□□□ -0.34
VPS37AQ8NEZ2 AC006033.1-201ENST00000440505 426 ntBASIC12.95□□□□□ -0.34
VPS37AQ8NEZ2 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC12.95□□□□□ -0.34
VPS37AQ8NEZ2 AC006335.1-201ENST00000445200 547 ntBASIC12.95□□□□□ -0.34
VPS37AQ8NEZ2 AC005077.3-201ENST00000449614 213 ntBASIC12.95□□□□□ -0.34
VPS37AQ8NEZ2 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
VPS37AQ8NEZ2 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC12.95□□□□□ -0.34
VPS37AQ8NEZ2 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC12.95□□□□□ -0.34
VPS37AQ8NEZ2 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC12.95□□□□□ -0.34
VPS37AQ8NEZ2 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
VPS37AQ8NEZ2 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
VPS37AQ8NEZ2 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC12.95□□□□□ -0.34
VPS37AQ8NEZ2 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
VPS37AQ8NEZ2 RN7SL219P-201ENST00000582872 296 ntBASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms