Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 FAM71E2-201ENST00000424985 3191 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
PRICKLE4Q2TBC4 PRMT5-202ENST00000324366 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PRICKLE4Q2TBC4 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PRICKLE4Q2TBC4 ITFG1-204ENST00000544001 1849 ntTSL 2 BASIC12.51□□□□□ -0.41
PRICKLE4Q2TBC4 ATP6V1B1-201ENST00000234396 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PRICKLE4Q2TBC4 TGM3-201ENST00000381458 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PRICKLE4Q2TBC4 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
PRICKLE4Q2TBC4 RHOH-222ENST00000617441 1872 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
PRICKLE4Q2TBC4 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
PRICKLE4Q2TBC4 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
PRICKLE4Q2TBC4 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PRICKLE4Q2TBC4 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PRICKLE4Q2TBC4 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
PRICKLE4Q2TBC4 ZFP69B-201ENST00000361584 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PRICKLE4Q2TBC4 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
PRICKLE4Q2TBC4 BAK1P1-201ENST00000317045 636 ntBASIC12.51□□□□□ -0.41
PRICKLE4Q2TBC4 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
PRICKLE4Q2TBC4 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC12.51□□□□□ -0.41
PRICKLE4Q2TBC4 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
PRICKLE4Q2TBC4 SFTPA1-203ENST00000428376 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PRICKLE4Q2TBC4 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC12.51□□□□□ -0.41
PRICKLE4Q2TBC4 NALT1-202ENST00000450304 437 ntTSL 3 BASIC12.51□□□□□ -0.41
PRICKLE4Q2TBC4 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PRICKLE4Q2TBC4 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PRICKLE4Q2TBC4 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC12.51□□□□□ -0.41
PRICKLE4Q2TBC4 AK2-208ENST00000487289 920 ntTSL 2 BASIC12.51□□□□□ -0.41
PRICKLE4Q2TBC4 TBC1D3P6-201ENST00000505954 962 ntBASIC12.51□□□□□ -0.41
PRICKLE4Q2TBC4 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC12.51□□□□□ -0.41
PRICKLE4Q2TBC4 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC12.51□□□□□ -0.41
PRICKLE4Q2TBC4 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC12.51□□□□□ -0.41
PRICKLE4Q2TBC4 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
PRICKLE4Q2TBC4 MIR4722-201ENST00000578292 60 ntBASIC12.51□□□□□ -0.41
PRICKLE4Q2TBC4 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
PRICKLE4Q2TBC4 AC002985.1-201ENST00000596918 685 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
PRICKLE4Q2TBC4 AC010976.2-201ENST00000609697 852 ntBASIC12.51□□□□□ -0.41
PRICKLE4Q2TBC4 AC073869.4-201ENST00000620841 800 ntBASIC12.51□□□□□ -0.41
PRICKLE4Q2TBC4 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC12.51□□□□□ -0.41
PRICKLE4Q2TBC4 AC026336.4-201ENST00000624565 1050 ntBASIC12.51□□□□□ -0.41
PRICKLE4Q2TBC4 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC12.51□□□□□ -0.41
PRICKLE4Q2TBC4 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
PRICKLE4Q2TBC4 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
PRICKLE4Q2TBC4 CC2D1A-208ENST00000589606 3117 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PRICKLE4Q2TBC4 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
PRICKLE4Q2TBC4 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PRICKLE4Q2TBC4 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
PRICKLE4Q2TBC4 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PRICKLE4Q2TBC4 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
PRICKLE4Q2TBC4 AC006144.1-201ENST00000424220 1600 ntBASIC12.51□□□□□ -0.41
PRICKLE4Q2TBC4 DDC-206ENST00000431062 1620 ntTSL 5 BASIC12.51□□□□□ -0.41
PRICKLE4Q2TBC4 DDX11L1-202ENST00000456328 1657 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
PRICKLE4Q2TBC4 DDX11L10-202ENST00000513886 1652 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
PRICKLE4Q2TBC4 SOX30-203ENST00000519442 1666 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
PRICKLE4Q2TBC4 DDX11L9-203ENST00000562189 1652 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
PRICKLE4Q2TBC4 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC12.51□□□□□ -0.41
PRICKLE4Q2TBC4 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
PRICKLE4Q2TBC4 TRAPPC4-214ENST00000533632 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PRICKLE4Q2TBC4 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
PRICKLE4Q2TBC4 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PRICKLE4Q2TBC4 ZCRB1-201ENST00000266529 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PRICKLE4Q2TBC4 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
PRICKLE4Q2TBC4 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
PRICKLE4Q2TBC4 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC12.51□□□□□ -0.41
PRICKLE4Q2TBC4 AL356130.1-201ENST00000620188 1965 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
PRICKLE4Q2TBC4 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PRICKLE4Q2TBC4 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
PRICKLE4Q2TBC4 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC12.5□□□□□ -0.41
PRICKLE4Q2TBC4 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
PRICKLE4Q2TBC4 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PRICKLE4Q2TBC4 GPR55-205ENST00000622008 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PRICKLE4Q2TBC4 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PRICKLE4Q2TBC4 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
PRICKLE4Q2TBC4 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC12.5□□□□□ -0.41
PRICKLE4Q2TBC4 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
PRICKLE4Q2TBC4 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
PRICKLE4Q2TBC4 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
PRICKLE4Q2TBC4 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC12.5□□□□□ -0.41
PRICKLE4Q2TBC4 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
PRICKLE4Q2TBC4 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
PRICKLE4Q2TBC4 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
PRICKLE4Q2TBC4 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PRICKLE4Q2TBC4 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PRICKLE4Q2TBC4 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
PRICKLE4Q2TBC4 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC12.5□□□□□ -0.41
PRICKLE4Q2TBC4 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
PRICKLE4Q2TBC4 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
PRICKLE4Q2TBC4 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC12.5□□□□□ -0.41
PRICKLE4Q2TBC4 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC12.5□□□□□ -0.41
PRICKLE4Q2TBC4 AP000244.1-201ENST00000424582 201 ntBASIC12.5□□□□□ -0.41
PRICKLE4Q2TBC4 AC092810.2-201ENST00000431570 362 ntBASIC12.5□□□□□ -0.41
PRICKLE4Q2TBC4 AC012362.1-201ENST00000434906 739 ntBASIC12.5□□□□□ -0.41
PRICKLE4Q2TBC4 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC12.5□□□□□ -0.41
PRICKLE4Q2TBC4 IGHV3-37-201ENST00000518544 340 ntBASIC12.5□□□□□ -0.41
PRICKLE4Q2TBC4 CFL1-206ENST00000527344 962 ntTSL 2 BASIC12.5□□□□□ -0.41
PRICKLE4Q2TBC4 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC12.5□□□□□ -0.41
PRICKLE4Q2TBC4 AC079336.3-201ENST00000577227 475 ntTSL 3 BASIC12.5□□□□□ -0.41
PRICKLE4Q2TBC4 NAMA-206ENST00000605377 509 ntTSL 5 BASIC12.5□□□□□ -0.41
PRICKLE4Q2TBC4 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PRICKLE4Q2TBC4 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC12.5□□□□□ -0.41
PRICKLE4Q2TBC4 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PRICKLE4Q2TBC4 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms