Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CLDN20P56880 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
CLDN20P56880 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
CLDN20P56880 AC104758.3-203ENST00000562938 2123 ntBASIC12.46□□□□□ -0.41
CLDN20P56880 MSNP1-201ENST00000511640 1732 ntBASIC12.46□□□□□ -0.41
CLDN20P56880 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CLDN20P56880 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CLDN20P56880 AC040160.2-201ENST00000623816 1675 ntBASIC12.46□□□□□ -0.41
CLDN20P56880 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CLDN20P56880 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CLDN20P56880 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
CLDN20P56880 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC12.46□□□□□ -0.41
CLDN20P56880 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
CLDN20P56880 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
CLDN20P56880 OR2W2P-201ENST00000406313 909 ntBASIC12.46□□□□□ -0.41
CLDN20P56880 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CLDN20P56880 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC12.46□□□□□ -0.41
CLDN20P56880 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC12.46□□□□□ -0.41
CLDN20P56880 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC12.46□□□□□ -0.41
CLDN20P56880 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC12.46□□□□□ -0.41
CLDN20P56880 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CLDN20P56880 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
CLDN20P56880 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC12.46□□□□□ -0.41
CLDN20P56880 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC12.46□□□□□ -0.41
CLDN20P56880 RN7SL736P-201ENST00000613111 269 ntBASIC12.46□□□□□ -0.41
CLDN20P56880 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
CLDN20P56880 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CLDN20P56880 AC102953.2-201ENST00000609755 3026 ntBASIC12.46□□□□□ -0.41
CLDN20P56880 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC12.46□□□□□ -0.41
CLDN20P56880 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
CLDN20P56880 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CLDN20P56880 LINC02015-202ENST00000436078 2957 ntTSL 2 BASIC12.46□□□□□ -0.42
CLDN20P56880 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
CLDN20P56880 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
CLDN20P56880 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CLDN20P56880 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
CLDN20P56880 GPR39-201ENST00000329321 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CLDN20P56880 TVP23A-201ENST00000299866 3360 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
CLDN20P56880 ESRRB-201ENST00000380887 2745 ntTSL 5 BASIC12.46□□□□□ -0.42
CLDN20P56880 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CLDN20P56880 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CLDN20P56880 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC12.45□□□□□ -0.42
CLDN20P56880 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC12.45□□□□□ -0.42
CLDN20P56880 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC12.45□□□□□ -0.42
CLDN20P56880 LINC00638-201ENST00000555578 2518 ntBASIC12.45□□□□□ -0.42
CLDN20P56880 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC12.45□□□□□ -0.42
CLDN20P56880 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CLDN20P56880 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
CLDN20P56880 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC12.45□□□□□ -0.42
CLDN20P56880 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC12.45□□□□□ -0.42
CLDN20P56880 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC12.45□□□□□ -0.42
CLDN20P56880 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CLDN20P56880 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
CLDN20P56880 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC12.45□□□□□ -0.42
CLDN20P56880 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CLDN20P56880 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC12.45□□□□□ -0.42
CLDN20P56880 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC12.45□□□□□ -0.42
CLDN20P56880 AC007279.1-201ENST00000448547 837 ntBASIC12.45□□□□□ -0.42
CLDN20P56880 RN7SL8P-201ENST00000461771 266 ntBASIC12.45□□□□□ -0.42
CLDN20P56880 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC12.45□□□□□ -0.42
CLDN20P56880 RPS23-204ENST00000507980 836 ntTSL 2 BASIC12.45□□□□□ -0.42
CLDN20P56880 HNRNPH1-216ENST00000510411 2105 ntTSL 5 BASIC12.45□□□□□ -0.42
CLDN20P56880 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC12.45□□□□□ -0.42
CLDN20P56880 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC12.45□□□□□ -0.42
CLDN20P56880 MIR4649-201ENST00000582839 64 ntBASIC12.45□□□□□ -0.42
CLDN20P56880 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC12.45□□□□□ -0.42
CLDN20P56880 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CLDN20P56880 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC12.45□□□□□ -0.42
CLDN20P56880 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC12.45□□□□□ -0.42
CLDN20P56880 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
CLDN20P56880 CSNK1G1-205ENST00000607537 2083 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CLDN20P56880 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC12.45□□□□□ -0.42
CLDN20P56880 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC12.45□□□□□ -0.42
CLDN20P56880 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CLDN20P56880 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CLDN20P56880 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC12.45□□□□□ -0.42
CLDN20P56880 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CLDN20P56880 CPN2-201ENST00000323830 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CLDN20P56880 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
CLDN20P56880 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
CLDN20P56880 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC12.45□□□□□ -0.42
CLDN20P56880 AC117503.4-201ENST00000623229 1418 ntBASIC12.45□□□□□ -0.42
CLDN20P56880 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC12.45□□□□□ -0.42
CLDN20P56880 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CLDN20P56880 ZNF595-205ENST00000610261 2911 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
CLDN20P56880 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC12.44□□□□□ -0.42
CLDN20P56880 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC12.44□□□□□ -0.42
CLDN20P56880 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CLDN20P56880 DPP8-201ENST00000300141 3139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CLDN20P56880 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CLDN20P56880 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CLDN20P56880 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
CLDN20P56880 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC12.44□□□□□ -0.42
CLDN20P56880 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
CLDN20P56880 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CLDN20P56880 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CLDN20P56880 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CLDN20P56880 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC12.44□□□□□ -0.42
CLDN20P56880 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC12.44□□□□□ -0.42
CLDN20P56880 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms