Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 VAMP7-201ENST00000262640 2496 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 RORC-201ENST00000318247 2180 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 SLC22A6-202ENST00000377871 2151 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 ZSCAN21-201ENST00000292450 2005 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 C20orf96-203ENST00000400269 1608 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 ZSCAN32-203ENST00000396852 3169 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 FPR2-203ENST00000598953 1544 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 CDK5RAP3-202ENST00000536708 1975 ntTSL 2 BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 PEX5-201ENST00000266563 3252 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 C2-211ENST00000469372 1906 ntTSL 2 BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 AP4S1-203ENST00000334725 1122 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 S100B-202ENST00000367071 971 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 RPL5-202ENST00000370321 1043 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 HLA-DQB3-203ENST00000425319 356 ntBASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 AL445933.2-201ENST00000440249 265 ntTSL 2 BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 XIAP-AS1-201ENST00000458331 482 ntTSL 3 BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 AC113340.1-201ENST00000475257 636 ntBASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 RPLP0P2-204ENST00000490750 961 ntBASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 HINT1-208ENST00000513012 583 ntTSL 4 BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 WISP1-204ENST00000517423 716 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 AC007923.4-201ENST00000578650 568 ntTSL 4 BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 AC064862.6-203ENST00000605139 691 ntTSL 5 BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 AC007450.4-201ENST00000614709 524 ntBASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 KRTAP10-9-203ENST00000616529 615 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 LINC00656-201ENST00000443744 1896 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 STK24-201ENST00000376547 2492 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 UCKL1-AS1-201ENST00000623569 3602 ntBASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 AOC4P-203ENST00000566825 2289 ntBASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 TRIT1-201ENST00000316891 2112 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 DPH2-201ENST00000255108 2472 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 CCNH-203ENST00000504878 1497 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 ACRBP-202ENST00000414226 1700 ntTSL 2 BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 SMUG1-AS1-201ENST00000634796 1734 ntTSL 5 BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 GLIPR2-201ENST00000377959 812 ntTSL 3 BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 SUMF1-203ENST00000405420 1128 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 MESTP4-201ENST00000412333 1204 ntBASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 PLA2G6-213ENST00000447598 567 ntTSL 5 BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 AL031773.1-201ENST00000453579 554 ntTSL 3 BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 GOLGA2-210ENST00000490628 428 ntTSL 2 BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 MAF1-204ENST00000532522 1098 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 AL355353.1-201ENST00000604014 330 ntBASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 AC009133.3-201ENST00000565600 1656 ntTSL 5 BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 ZKSCAN1-202ENST00000426572 2011 ntTSL 2 BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 PRAMEF20-202ENST00000602960 1502 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 PMEL-215ENST00000550464 1867 ntAPPRIS ALT2 TSL 2 BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 CACNA1G-AS1-202ENST00000505793 1433 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 PMS1-204ENST00000409823 2795 ntTSL 5 BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 FAM170A-206ENST00000613773 1374 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 OR6N1-201ENST00000335094 1027 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 ALDH7A1-203ENST00000413020 1126 ntTSL 2 BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 AC023157.1-201ENST00000453713 402 ntBASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 AC092944.1-204ENST00000475102 384 ntTSL 5 BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 AC022217.2-201ENST00000518941 472 ntTSL 2 BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 AL391152.1-202ENST00000551408 624 ntTSL 3 BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 AC121757.1-201ENST00000552441 624 ntTSL 5 BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 AL353708.1-201ENST00000567904 1257 ntBASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 AC069366.2-201ENST00000583643 430 ntBASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 AC125494.1-202ENST00000586338 723 ntTSL 5 BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 TMEM253-201ENST00000418511 1526 ntAPPRIS P2 TSL 5 BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 AP001046.1-201ENST00000435702 2816 ntTSL 2 BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 AC104581.4-201ENST00000623126 3052 ntBASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 CYFIP2-222ENST00000620254 4124 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 ATL2-201ENST00000378954 2868 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 AC007322.2-201ENST00000414540 605 ntBASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 ACTBP1-201ENST00000417985 1113 ntBASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 AC253536.2-201ENST00000423307 254 ntBASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 AL356488.1-201ENST00000429752 609 ntBASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 AC006372.1-201ENST00000449903 546 ntTSL 2 BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 AL592463.1-201ENST00000451108 635 ntTSL 3 BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 AC091893.1-201ENST00000503772 399 ntBASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 LINC02163-201ENST00000514769 574 ntTSL 4 BASIC8.61□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms