Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
AP1S2P56377 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC13.2□□□□□ -0.3
AP1S2P56377 HNRNPA1P33-201ENST00000421426 561 ntBASIC13.2□□□□□ -0.3
AP1S2P56377 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC13.2□□□□□ -0.3
AP1S2P56377 NOC2LP1-201ENST00000450578 752 ntBASIC13.2□□□□□ -0.3
AP1S2P56377 C3orf35-206ENST00000452017 513 ntAPPRIS P5 TSL 5 BASIC13.2□□□□□ -0.3
AP1S2P56377 DPY19L2P5-201ENST00000456300 331 ntBASIC13.2□□□□□ -0.3
AP1S2P56377 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC13.2□□□□□ -0.3
AP1S2P56377 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
AP1S2P56377 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC13.2□□□□□ -0.3
AP1S2P56377 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC13.2□□□□□ -0.3
AP1S2P56377 NEU3-207ENST00000534628 746 ntTSL 2 BASIC13.2□□□□□ -0.3
AP1S2P56377 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
AP1S2P56377 PRKXP1-201ENST00000561423 1122 ntBASIC13.2□□□□□ -0.3
AP1S2P56377 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC13.2□□□□□ -0.3
AP1S2P56377 RN7SL470P-201ENST00000583069 259 ntBASIC13.2□□□□□ -0.3
AP1S2P56377 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC13.2□□□□□ -0.3
AP1S2P56377 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC13.2□□□□□ -0.3
AP1S2P56377 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC13.2□□□□□ -0.3
AP1S2P56377 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
AP1S2P56377 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
AP1S2P56377 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
AP1S2P56377 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
AP1S2P56377 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
AP1S2P56377 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
AP1S2P56377 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
AP1S2P56377 MRRF-201ENST00000297908 1841 ntTSL 2 BASIC13.2□□□□□ -0.3
AP1S2P56377 SMARCA2-209ENST00000382203 5867 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
AP1S2P56377 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
AP1S2P56377 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC13.2□□□□□ -0.3
AP1S2P56377 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
AP1S2P56377 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
AP1S2P56377 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
AP1S2P56377 GK-203ENST00000378943 3707 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
AP1S2P56377 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
AP1S2P56377 EPS8L3-201ENST00000361852 2130 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
AP1S2P56377 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
AP1S2P56377 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
AP1S2P56377 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
AP1S2P56377 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC13.19□□□□□ -0.3
AP1S2P56377 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
AP1S2P56377 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
AP1S2P56377 AL022323.5-201ENST00000624101 2059 ntBASIC13.19□□□□□ -0.3
AP1S2P56377 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
AP1S2P56377 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC13.19□□□□□ -0.3
AP1S2P56377 DIAPH2-201ENST00000324765 9333 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
AP1S2P56377 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
AP1S2P56377 CA6-205ENST00000480186 1493 ntTSL 2 BASIC13.19□□□□□ -0.3
AP1S2P56377 TMEM182-202ENST00000409528 3112 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
AP1S2P56377 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
AP1S2P56377 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
AP1S2P56377 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
AP1S2P56377 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
AP1S2P56377 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
AP1S2P56377 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
AP1S2P56377 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
AP1S2P56377 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
AP1S2P56377 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
AP1S2P56377 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC13.19□□□□□ -0.3
AP1S2P56377 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
AP1S2P56377 UFM1-202ENST00000379649 846 ntTSL 4 BASIC13.19□□□□□ -0.3
AP1S2P56377 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC13.19□□□□□ -0.3
AP1S2P56377 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC13.19□□□□□ -0.3
AP1S2P56377 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC13.19□□□□□ -0.3
AP1S2P56377 FGFR3P1-201ENST00000449999 601 ntBASIC13.19□□□□□ -0.3
AP1S2P56377 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC13.19□□□□□ -0.3
AP1S2P56377 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC13.19□□□□□ -0.3
AP1S2P56377 RPS23-204ENST00000507980 836 ntTSL 2 BASIC13.19□□□□□ -0.3
AP1S2P56377 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC13.19□□□□□ -0.3
AP1S2P56377 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
AP1S2P56377 RN7SL556P-201ENST00000582856 298 ntBASIC13.19□□□□□ -0.3
AP1S2P56377 AC007998.2-201ENST00000589258 455 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
AP1S2P56377 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
AP1S2P56377 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
AP1S2P56377 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
AP1S2P56377 Z97653.2-201ENST00000623057 1418 ntBASIC13.19□□□□□ -0.3
AP1S2P56377 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
AP1S2P56377 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC13.19□□□□□ -0.3
AP1S2P56377 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
AP1S2P56377 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
AP1S2P56377 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
AP1S2P56377 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC13.19□□□□□ -0.3
AP1S2P56377 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
AP1S2P56377 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
AP1S2P56377 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
AP1S2P56377 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
AP1S2P56377 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC13.18□□□□□ -0.3
AP1S2P56377 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC13.18□□□□□ -0.3
AP1S2P56377 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC13.18□□□□□ -0.3
AP1S2P56377 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
AP1S2P56377 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
AP1S2P56377 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
AP1S2P56377 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC13.18□□□□□ -0.3
AP1S2P56377 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
AP1S2P56377 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC13.18□□□□□ -0.3
AP1S2P56377 ZNF595-203ENST00000608255 1999 ntTSL 2 BASIC13.18□□□□□ -0.3
AP1S2P56377 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC13.18□□□□□ -0.3
AP1S2P56377 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
AP1S2P56377 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC13.18□□□□□ -0.3
AP1S2P56377 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms