Protein–RNA interactions for Protein: P33778

HIST1H2BB, Histone H2B type 1-B, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BBP33778 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
HIST1H2BBP33778 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
HIST1H2BBP33778 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC10.07□□□□□ -0.8
HIST1H2BBP33778 ADH5P3-201ENST00000433842 1137 ntBASIC10.07□□□□□ -0.8
HIST1H2BBP33778 SPDYE11-202ENST00000450699 704 ntBASIC10.07□□□□□ -0.8
HIST1H2BBP33778 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
HIST1H2BBP33778 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
HIST1H2BBP33778 AC068587.3-201ENST00000526613 355 ntBASIC10.07□□□□□ -0.8
HIST1H2BBP33778 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC10.07□□□□□ -0.8
HIST1H2BBP33778 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC10.07□□□□□ -0.8
HIST1H2BBP33778 SPDYE9P-201ENST00000570642 692 ntBASIC10.07□□□□□ -0.8
HIST1H2BBP33778 NT5C-211ENST00000582170 653 ntTSL 3 BASIC10.07□□□□□ -0.8
HIST1H2BBP33778 CTBP2P3-201ENST00000585629 1255 ntBASIC10.07□□□□□ -0.8
HIST1H2BBP33778 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC10.07□□□□□ -0.8
HIST1H2BBP33778 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC10.07□□□□□ -0.8
HIST1H2BBP33778 SPDYE10P-202ENST00000612005 668 ntBASIC10.07□□□□□ -0.8
HIST1H2BBP33778 SPDYE8P-202ENST00000612377 668 ntBASIC10.07□□□□□ -0.8
HIST1H2BBP33778 AC007967.4-201ENST00000614700 386 ntBASIC10.07□□□□□ -0.8
HIST1H2BBP33778 FAM197Y3-203ENST00000618346 717 ntBASIC10.07□□□□□ -0.8
HIST1H2BBP33778 AC055717.3-201ENST00000622967 595 ntBASIC10.07□□□□□ -0.8
HIST1H2BBP33778 RNF6-203ENST00000381588 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
HIST1H2BBP33778 NDRG4-203ENST00000394279 3431 ntTSL 5 BASIC10.07□□□□□ -0.8
HIST1H2BBP33778 RAP1GAP2-204ENST00000542807 3110 ntAPPRIS P4 TSL 5 BASIC10.07□□□□□ -0.8
HIST1H2BBP33778 PEX5L-208ENST00000467460 9082 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
HIST1H2BBP33778 AC092447.8-201ENST00000566570 4162 ntBASIC10.07□□□□□ -0.8
HIST1H2BBP33778 LIF-201ENST00000249075 3969 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
HIST1H2BBP33778 RNF17-202ENST00000255325 2134 ntTSL 2 BASIC10.07□□□□□ -0.8
HIST1H2BBP33778 LHFPL5-201ENST00000360215 2148 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
HIST1H2BBP33778 LHX6-203ENST00000373755 3384 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
HIST1H2BBP33778 TP53TG3F-201ENST00000617705 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
HIST1H2BBP33778 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
HIST1H2BBP33778 STPG4-201ENST00000294947 1621 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
HIST1H2BBP33778 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC10.07□□□□□ -0.8
HIST1H2BBP33778 OSBPL7-201ENST00000007414 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
HIST1H2BBP33778 TAF6-213ENST00000472509 2551 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
HIST1H2BBP33778 ITGAX-204ENST00000562918 1521 ntTSL 2 BASIC10.07□□□□□ -0.8
HIST1H2BBP33778 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC10.07□□□□□ -0.8
HIST1H2BBP33778 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC10.07□□□□□ -0.8
HIST1H2BBP33778 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
HIST1H2BBP33778 TIRAP-202ENST00000392679 2195 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
HIST1H2BBP33778 PCDHGB4-202ENST00000615384 4725 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
HIST1H2BBP33778 SPRYD3-201ENST00000301463 2932 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
HIST1H2BBP33778 RHD-201ENST00000328664 2930 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
HIST1H2BBP33778 ANGEL1-201ENST00000251089 5176 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
HIST1H2BBP33778 ZNF621-202ENST00000339296 6378 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
HIST1H2BBP33778 LDB3-203ENST00000372056 1868 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
HIST1H2BBP33778 LINC01443-202ENST00000584531 1854 ntTSL 2 BASIC10.06□□□□□ -0.8
HIST1H2BBP33778 NLRP1-208ENST00000571451 5444 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
HIST1H2BBP33778 CCDC81-202ENST00000445632 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
HIST1H2BBP33778 SNRPN-205ENST00000400100 1751 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
HIST1H2BBP33778 AC008663.2-201ENST00000517299 1777 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
HIST1H2BBP33778 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
HIST1H2BBP33778 CDC42BPA-203ENST00000366766 10610 ntTSL 5 BASIC10.06□□□□□ -0.8
HIST1H2BBP33778 CYP2B6-201ENST00000324071 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
HIST1H2BBP33778 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC10.06□□□□□ -0.8
HIST1H2BBP33778 LILRA1-202ENST00000453777 2313 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
HIST1H2BBP33778 BAZ2A-201ENST00000379441 8831 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
HIST1H2BBP33778 R3HDM2-215ENST00000634871 4092 ntTSL 5 BASIC10.06□□□□□ -0.8
HIST1H2BBP33778 COX18-201ENST00000295890 6846 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
HIST1H2BBP33778 RAP1GAP2-203ENST00000540393 3218 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
HIST1H2BBP33778 TRIM40-206ENST00000376724 2006 ntAPPRIS ALT2 TSL 2 BASIC10.06□□□□□ -0.8
HIST1H2BBP33778 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC10.06□□□□□ -0.8
HIST1H2BBP33778 EHD2-201ENST00000263277 3585 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
HIST1H2BBP33778 ECM1-203ENST00000369049 1925 ntAPPRIS ALT2 TSL 2 BASIC10.06□□□□□ -0.8
HIST1H2BBP33778 PPP1R1A-202ENST00000547431 2491 ntTSL 5 BASIC10.06□□□□□ -0.8
HIST1H2BBP33778 CUL9-201ENST00000252050 7780 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
HIST1H2BBP33778 AC133919.3-201ENST00000621407 1804 ntBASIC10.06□□□□□ -0.8
HIST1H2BBP33778 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
HIST1H2BBP33778 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
HIST1H2BBP33778 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
HIST1H2BBP33778 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC10.06□□□□□ -0.8
HIST1H2BBP33778 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
HIST1H2BBP33778 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC10.06□□□□□ -0.8
HIST1H2BBP33778 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC10.06□□□□□ -0.8
HIST1H2BBP33778 AC093433.1-201ENST00000458048 571 ntBASIC10.06□□□□□ -0.8
HIST1H2BBP33778 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC10.06□□□□□ -0.8
HIST1H2BBP33778 MESTP3-201ENST00000503460 968 ntBASIC10.06□□□□□ -0.8
HIST1H2BBP33778 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
HIST1H2BBP33778 GOLGA2P8-201ENST00000505201 779 ntBASIC10.06□□□□□ -0.8
HIST1H2BBP33778 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC10.06□□□□□ -0.8
HIST1H2BBP33778 GANAB-216ENST00000540933 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
HIST1H2BBP33778 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC10.06□□□□□ -0.8
HIST1H2BBP33778 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC10.06□□□□□ -0.8
HIST1H2BBP33778 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
HIST1H2BBP33778 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC10.06□□□□□ -0.8
HIST1H2BBP33778 AC012306.2-201ENST00000609350 630 ntBASIC10.06□□□□□ -0.8
HIST1H2BBP33778 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC10.06□□□□□ -0.8
HIST1H2BBP33778 AL109936.8-201ENST00000641772 604 ntBASIC10.06□□□□□ -0.8
HIST1H2BBP33778 HSD3B2-201ENST00000369416 1741 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
HIST1H2BBP33778 MRPL22-207ENST00000523037 3176 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
HIST1H2BBP33778 LUZP1-201ENST00000302291 8898 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
HIST1H2BBP33778 THRAP3-201ENST00000354618 4432 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
HIST1H2BBP33778 PLXDC1-206ENST00000444911 2082 ntTSL 2 BASIC10.06□□□□□ -0.8
HIST1H2BBP33778 CCND1-201ENST00000227507 4307 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
HIST1H2BBP33778 CDC42BPA-202ENST00000366764 10445 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
HIST1H2BBP33778 PALM2-202ENST00000374531 4492 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
HIST1H2BBP33778 IL21R-201ENST00000337929 4849 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
HIST1H2BBP33778 SOX9-201ENST00000245479 3935 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
HIST1H2BBP33778 CLPB-203ENST00000437826 3379 ntTSL 2 BASIC10.06□□□□□ -0.8
HIST1H2BBP33778 AC126323.1-203ENST00000562306 2579 ntBASIC10.06□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms