Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
KDELR3O43731 UGT3A1-203ENST00000503189 1902 ntTSL 2 BASIC13.66□□□□□ -0.22
KDELR3O43731 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
KDELR3O43731 MRFAP1L1-201ENST00000320848 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
KDELR3O43731 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
KDELR3O43731 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
KDELR3O43731 Z98259.1-201ENST00000564261 1697 ntBASIC13.66□□□□□ -0.22
KDELR3O43731 TRNAU1AP-201ENST00000373830 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
KDELR3O43731 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
KDELR3O43731 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.66□□□□□ -0.22
KDELR3O43731 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
KDELR3O43731 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
KDELR3O43731 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
KDELR3O43731 ZNF621-204ENST00000431278 2613 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
KDELR3O43731 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
KDELR3O43731 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC13.65□□□□□ -0.22
KDELR3O43731 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
KDELR3O43731 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
KDELR3O43731 TMEM182-202ENST00000409528 3112 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
KDELR3O43731 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
KDELR3O43731 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC13.65□□□□□ -0.22
KDELR3O43731 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
KDELR3O43731 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
KDELR3O43731 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
KDELR3O43731 UBIAD1-201ENST00000376804 825 ntTSL 2 BASIC13.65□□□□□ -0.22
KDELR3O43731 MPV17-209ENST00000405983 859 ntTSL 5 BASIC13.65□□□□□ -0.22
KDELR3O43731 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
KDELR3O43731 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC13.65□□□□□ -0.22
KDELR3O43731 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
KDELR3O43731 RAB34-211ENST00000450529 1184 ntTSL 2 BASIC13.65□□□□□ -0.22
KDELR3O43731 C3orf35-206ENST00000452017 513 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.22
KDELR3O43731 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC13.65□□□□□ -0.22
KDELR3O43731 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
KDELR3O43731 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC13.65□□□□□ -0.22
KDELR3O43731 SLC25A51P3-201ENST00000521814 889 ntBASIC13.65□□□□□ -0.22
KDELR3O43731 F11R-204ENST00000537746 1245 ntTSL 2 BASIC13.65□□□□□ -0.22
KDELR3O43731 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC13.65□□□□□ -0.22
KDELR3O43731 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC13.65□□□□□ -0.22
KDELR3O43731 MFSD12-215ENST00000615613 688 ntBASIC13.65□□□□□ -0.22
KDELR3O43731 AC127024.7-201ENST00000625101 200 ntBASIC13.65□□□□□ -0.22
KDELR3O43731 ZSCAN32-202ENST00000396846 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
KDELR3O43731 AC034205.3-201ENST00000603595 1376 ntBASIC13.65□□□□□ -0.22
KDELR3O43731 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC13.65□□□□□ -0.22
KDELR3O43731 KRT18P40-201ENST00000599859 1571 ntBASIC13.65□□□□□ -0.22
KDELR3O43731 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
KDELR3O43731 ZFAND1-201ENST00000220669 1798 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
KDELR3O43731 HAO1-201ENST00000378789 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
KDELR3O43731 ZFAND1-221ENST00000523096 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
KDELR3O43731 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
KDELR3O43731 AC115284.2-201ENST00000624646 2054 ntBASIC13.65□□□□□ -0.22
KDELR3O43731 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC13.65□□□□□ -0.22
KDELR3O43731 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
KDELR3O43731 EHMT2-203ENST00000375537 3965 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
KDELR3O43731 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
KDELR3O43731 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
KDELR3O43731 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
KDELR3O43731 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
KDELR3O43731 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC13.64□□□□□ -0.23
KDELR3O43731 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
KDELR3O43731 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
KDELR3O43731 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
KDELR3O43731 AC087386.2-201ENST00000623212 4637 ntBASIC13.64□□□□□ -0.23
KDELR3O43731 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
KDELR3O43731 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
KDELR3O43731 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
KDELR3O43731 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
KDELR3O43731 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
KDELR3O43731 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
KDELR3O43731 CCDC149-208ENST00000635206 2362 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
KDELR3O43731 INHBC-201ENST00000309668 1992 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
KDELR3O43731 DIO1-216ENST00000613679 1856 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
KDELR3O43731 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
KDELR3O43731 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
KDELR3O43731 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
KDELR3O43731 TCEAL5-201ENST00000372680 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
KDELR3O43731 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
KDELR3O43731 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
KDELR3O43731 HLA-DMA-202ENST00000395303 1007 ntBASIC13.64□□□□□ -0.23
KDELR3O43731 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
KDELR3O43731 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
KDELR3O43731 AL627389.1-201ENST00000413508 1182 ntBASIC13.64□□□□□ -0.23
KDELR3O43731 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
KDELR3O43731 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
KDELR3O43731 AC112250.1-201ENST00000504640 745 ntBASIC13.64□□□□□ -0.23
KDELR3O43731 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC13.64□□□□□ -0.23
KDELR3O43731 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC13.64□□□□□ -0.23
KDELR3O43731 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC13.64□□□□□ -0.23
KDELR3O43731 SRP14-204ENST00000558720 780 ntTSL 2 BASIC13.64□□□□□ -0.23
KDELR3O43731 URAHP-205ENST00000610227 398 ntBASIC13.64□□□□□ -0.23
KDELR3O43731 MIR6727-201ENST00000620702 65 ntBASIC13.64□□□□□ -0.23
KDELR3O43731 DUX4L33-201ENST00000635217 958 ntBASIC13.64□□□□□ -0.23
KDELR3O43731 MEP1AP1-201ENST00000636082 1097 ntBASIC13.64□□□□□ -0.23
KDELR3O43731 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
KDELR3O43731 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC13.64□□□□□ -0.23
KDELR3O43731 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC13.64□□□□□ -0.23
KDELR3O43731 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
KDELR3O43731 CFAP65-204ENST00000410037 2703 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
KDELR3O43731 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
KDELR3O43731 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
KDELR3O43731 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms