Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC11.93□□□□□ -0.5
NPIPB4C9JG80 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC11.93□□□□□ -0.5
NPIPB4C9JG80 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
NPIPB4C9JG80 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC11.93□□□□□ -0.5
NPIPB4C9JG80 STT3A-211ENST00000529196 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NPIPB4C9JG80 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
NPIPB4C9JG80 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
NPIPB4C9JG80 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
NPIPB4C9JG80 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC11.93□□□□□ -0.5
NPIPB4C9JG80 DDX11L1-202ENST00000456328 1657 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
NPIPB4C9JG80 DDX11L10-202ENST00000513886 1652 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
NPIPB4C9JG80 DDX11L9-203ENST00000562189 1652 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
NPIPB4C9JG80 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NPIPB4C9JG80 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NPIPB4C9JG80 ZDHHC8P1-202ENST00000418264 1403 ntBASIC11.93□□□□□ -0.5
NPIPB4C9JG80 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
NPIPB4C9JG80 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC11.93□□□□□ -0.5
NPIPB4C9JG80 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
NPIPB4C9JG80 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
NPIPB4C9JG80 ZFP69B-201ENST00000361584 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NPIPB4C9JG80 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NPIPB4C9JG80 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC11.92□□□□□ -0.5
NPIPB4C9JG80 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC11.92□□□□□ -0.5
NPIPB4C9JG80 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
NPIPB4C9JG80 AP002986.1-201ENST00000602376 1763 ntTSL 5 BASIC11.92□□□□□ -0.5
NPIPB4C9JG80 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
NPIPB4C9JG80 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
NPIPB4C9JG80 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
NPIPB4C9JG80 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NPIPB4C9JG80 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NPIPB4C9JG80 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NPIPB4C9JG80 GDPD5-204ENST00000526177 4150 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
NPIPB4C9JG80 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
NPIPB4C9JG80 ARHGEF9-235ENST00000637723 2146 ntTSL 5 BASIC11.92□□□□□ -0.5
NPIPB4C9JG80 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
NPIPB4C9JG80 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC11.92□□□□□ -0.5
NPIPB4C9JG80 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NPIPB4C9JG80 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NPIPB4C9JG80 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NPIPB4C9JG80 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
NPIPB4C9JG80 SCRN1-207ENST00000434476 1454 ntTSL 2 BASIC11.92□□□□□ -0.5
NPIPB4C9JG80 KRT8P25-201ENST00000473150 1456 ntBASIC11.92□□□□□ -0.5
NPIPB4C9JG80 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NPIPB4C9JG80 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NPIPB4C9JG80 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NPIPB4C9JG80 OR2V2-201ENST00000328275 948 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
NPIPB4C9JG80 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
NPIPB4C9JG80 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC11.92□□□□□ -0.5
NPIPB4C9JG80 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC11.92□□□□□ -0.5
NPIPB4C9JG80 AL357140.1-201ENST00000454104 424 ntTSL 2 BASIC11.92□□□□□ -0.5
NPIPB4C9JG80 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC11.92□□□□□ -0.5
NPIPB4C9JG80 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC11.92□□□□□ -0.5
NPIPB4C9JG80 AP002803.1-201ENST00000528836 498 ntBASIC11.92□□□□□ -0.5
NPIPB4C9JG80 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC11.92□□□□□ -0.5
NPIPB4C9JG80 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
NPIPB4C9JG80 AC090971.1-201ENST00000559302 510 ntTSL 2 BASIC11.92□□□□□ -0.5
NPIPB4C9JG80 RPL17P45-201ENST00000586289 509 ntBASIC11.92□□□□□ -0.5
NPIPB4C9JG80 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
NPIPB4C9JG80 AC005041.3-201ENST00000606287 649 ntBASIC11.92□□□□□ -0.5
NPIPB4C9JG80 YRDCP1-201ENST00000621419 643 ntBASIC11.92□□□□□ -0.5
NPIPB4C9JG80 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC11.92□□□□□ -0.5
NPIPB4C9JG80 AL160287.1-203ENST00000637960 1061 ntBASIC11.92□□□□□ -0.5
NPIPB4C9JG80 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NPIPB4C9JG80 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NPIPB4C9JG80 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NPIPB4C9JG80 ARMCX6-201ENST00000361910 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NPIPB4C9JG80 AL365181.1-201ENST00000564032 1828 ntBASIC11.92□□□□□ -0.5
NPIPB4C9JG80 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
NPIPB4C9JG80 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NPIPB4C9JG80 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
NPIPB4C9JG80 AC009123.1-202ENST00000565643 2551 ntTSL 2 BASIC11.92□□□□□ -0.5
NPIPB4C9JG80 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
NPIPB4C9JG80 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC11.92□□□□□ -0.5
NPIPB4C9JG80 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NPIPB4C9JG80 KLHL24-211ENST00000476808 2126 ntTSL 2 BASIC11.92□□□□□ -0.5
NPIPB4C9JG80 TNFSF8-201ENST00000223795 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NPIPB4C9JG80 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
NPIPB4C9JG80 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NPIPB4C9JG80 DDX11L2-201ENST00000437401 1398 ntBASIC11.92□□□□□ -0.5
NPIPB4C9JG80 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC11.92□□□□□ -0.5
NPIPB4C9JG80 NAMA-207ENST00000605707 1748 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
NPIPB4C9JG80 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
NPIPB4C9JG80 ANKRA2-201ENST00000296785 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NPIPB4C9JG80 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
NPIPB4C9JG80 MLX-203ENST00000435881 2428 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NPIPB4C9JG80 LILRA6-203ENST00000396365 1890 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
NPIPB4C9JG80 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC11.91□□□□□ -0.5
NPIPB4C9JG80 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
NPIPB4C9JG80 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NPIPB4C9JG80 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC11.91□□□□□ -0.5
NPIPB4C9JG80 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC11.91□□□□□ -0.5
NPIPB4C9JG80 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC11.91□□□□□ -0.5
NPIPB4C9JG80 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
NPIPB4C9JG80 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
NPIPB4C9JG80 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
NPIPB4C9JG80 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
NPIPB4C9JG80 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC11.91□□□□□ -0.5
NPIPB4C9JG80 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NPIPB4C9JG80 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
NPIPB4C9JG80 DTX3L-202ENST00000383661 687 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms