Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMG20BQ9P0W2 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMG20BQ9P0W2 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
HMG20BQ9P0W2 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HMG20BQ9P0W2 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMG20BQ9P0W2 OS9-218ENST00000551035 2246 ntTSL 2 BASIC16.41■□□□□ 0.22
HMG20BQ9P0W2 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMG20BQ9P0W2 MPV17-209ENST00000405983 859 ntTSL 5 BASIC16.41■□□□□ 0.22
HMG20BQ9P0W2 PPIL3-205ENST00000409449 756 ntTSL 5 BASIC16.41■□□□□ 0.22
HMG20BQ9P0W2 OR7E155P-201ENST00000412208 1014 ntBASIC16.41■□□□□ 0.22
HMG20BQ9P0W2 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMG20BQ9P0W2 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC16.41■□□□□ 0.22
HMG20BQ9P0W2 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC16.41■□□□□ 0.22
HMG20BQ9P0W2 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC16.41■□□□□ 0.22
HMG20BQ9P0W2 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
HMG20BQ9P0W2 AC068831.5-201ENST00000557387 328 ntBASIC16.41■□□□□ 0.22
HMG20BQ9P0W2 SRP14-204ENST00000558720 780 ntTSL 2 BASIC16.41■□□□□ 0.22
HMG20BQ9P0W2 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC16.41■□□□□ 0.22
HMG20BQ9P0W2 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC16.41■□□□□ 0.22
HMG20BQ9P0W2 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
HMG20BQ9P0W2 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC16.41■□□□□ 0.22
HMG20BQ9P0W2 PEBP1P2-201ENST00000603980 558 ntBASIC16.41■□□□□ 0.22
HMG20BQ9P0W2 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC16.41■□□□□ 0.22
HMG20BQ9P0W2 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMG20BQ9P0W2 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
HMG20BQ9P0W2 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
HMG20BQ9P0W2 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMG20BQ9P0W2 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC16.41■□□□□ 0.22
HMG20BQ9P0W2 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HMG20BQ9P0W2 AC005562.1-201ENST00000583030 3219 ntBASIC16.41■□□□□ 0.22
HMG20BQ9P0W2 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HMG20BQ9P0W2 DRD2-204ENST00000538967 1493 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
HMG20BQ9P0W2 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HMG20BQ9P0W2 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMG20BQ9P0W2 ADD1-207ENST00000446856 3745 ntTSL 5 BASIC16.41■□□□□ 0.22
HMG20BQ9P0W2 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
HMG20BQ9P0W2 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HMG20BQ9P0W2 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMG20BQ9P0W2 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMG20BQ9P0W2 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
HMG20BQ9P0W2 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC16.4■□□□□ 0.22
HMG20BQ9P0W2 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMG20BQ9P0W2 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMG20BQ9P0W2 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC16.4■□□□□ 0.22
HMG20BQ9P0W2 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMG20BQ9P0W2 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HMG20BQ9P0W2 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HMG20BQ9P0W2 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC16.4■□□□□ 0.22
HMG20BQ9P0W2 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC16.4■□□□□ 0.22
HMG20BQ9P0W2 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
HMG20BQ9P0W2 KRT8P38-201ENST00000441370 1430 ntBASIC16.4■□□□□ 0.22
HMG20BQ9P0W2 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC16.4■□□□□ 0.22
HMG20BQ9P0W2 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HMG20BQ9P0W2 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
HMG20BQ9P0W2 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
HMG20BQ9P0W2 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
HMG20BQ9P0W2 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC16.4■□□□□ 0.22
HMG20BQ9P0W2 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC16.4■□□□□ 0.22
HMG20BQ9P0W2 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
HMG20BQ9P0W2 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
HMG20BQ9P0W2 AP005212.2-201ENST00000584979 510 ntBASIC16.4■□□□□ 0.22
HMG20BQ9P0W2 AC005357.2-202ENST00000590507 1060 ntBASIC16.4■□□□□ 0.22
HMG20BQ9P0W2 AC008687.7-203ENST00000598442 551 ntTSL 4 BASIC16.4■□□□□ 0.22
HMG20BQ9P0W2 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HMG20BQ9P0W2 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC16.4■□□□□ 0.22
HMG20BQ9P0W2 DGCR9-201ENST00000609630 2415 ntBASIC16.4■□□□□ 0.22
HMG20BQ9P0W2 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
HMG20BQ9P0W2 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMG20BQ9P0W2 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMG20BQ9P0W2 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
HMG20BQ9P0W2 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMG20BQ9P0W2 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMG20BQ9P0W2 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMG20BQ9P0W2 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMG20BQ9P0W2 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMG20BQ9P0W2 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMG20BQ9P0W2 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
HMG20BQ9P0W2 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMG20BQ9P0W2 ECI2-207ENST00000465828 1548 ntTSL 5 BASIC16.4■□□□□ 0.22
HMG20BQ9P0W2 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC16.39■□□□□ 0.22
HMG20BQ9P0W2 AC099521.3-201ENST00000624251 2938 ntBASIC16.39■□□□□ 0.21
HMG20BQ9P0W2 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMG20BQ9P0W2 AC115284.2-201ENST00000624646 2054 ntBASIC16.39■□□□□ 0.21
HMG20BQ9P0W2 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMG20BQ9P0W2 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMG20BQ9P0W2 HPGD-204ENST00000504433 1910 ntTSL 2 BASIC16.39■□□□□ 0.21
HMG20BQ9P0W2 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMG20BQ9P0W2 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC16.39■□□□□ 0.21
HMG20BQ9P0W2 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMG20BQ9P0W2 SLC7A9-201ENST00000023064 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMG20BQ9P0W2 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HMG20BQ9P0W2 HSD3B2-206ENST00000543831 1783 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
HMG20BQ9P0W2 AP002761.4-201ENST00000565433 3361 ntBASIC16.39■□□□□ 0.21
HMG20BQ9P0W2 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HMG20BQ9P0W2 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HMG20BQ9P0W2 PTGER4P2-201ENST00000328411 252 ntBASIC16.39■□□□□ 0.21
HMG20BQ9P0W2 MRPS12-202ENST00000402029 929 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMG20BQ9P0W2 AL357079.1-203ENST00000412378 494 ntTSL 5 BASIC16.39■□□□□ 0.21
HMG20BQ9P0W2 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC16.39■□□□□ 0.21
HMG20BQ9P0W2 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms