Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 SUPT20HL1-201ENST00000436466 2618 ntBASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 AC007906.2-202ENST00000619363 1687 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 MED20-204ENST00000409312 932 ntTSL 2 BASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 RPL21P135-201ENST00000442539 791 ntBASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 CMTM1-206ENST00000457188 765 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 TSACC-206ENST00000466306 477 ntTSL 3 BASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 PIEZO1P1-201ENST00000485427 219 ntBASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 GIMD1-201ENST00000507153 654 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 CMTM1-215ENST00000531885 590 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 AL512631.1-201ENST00000604086 840 ntBASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 AC112236.2-201ENST00000608402 845 ntBASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 MIR4726-201ENST00000615971 58 ntBASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 NDRG4-254ENST00000569923 1312 ntTSL 2 BASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 AP003063.2-201ENST00000525984 2067 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 AP000925.1-201ENST00000425960 1449 ntBASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 ARMCX6-201ENST00000361910 1846 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 USP14-208ENST00000582707 1803 ntTSL 5 BASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 NAA50-203ENST00000477813 1945 ntTSL 5 BASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 ZNRD1ASP-215ENST00000425604 1986 ntTSL 3 BASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 BANP-203ENST00000393207 2438 ntTSL 2 BASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 C19orf38-201ENST00000397820 1223 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 AC246680.1-201ENST00000444624 494 ntTSL 3 BASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 AL132709.1-202ENST00000448840 588 ntTSL 3 BASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 LILRB1-AS1-201ENST00000456337 554 ntTSL 4 BASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 AC093627.3-201ENST00000467050 574 ntTSL 4 BASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 RPSAP5-201ENST00000485258 884 ntBASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 ZBED3-AS1-206ENST00000508401 582 ntTSL 2 BASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 EXTL3-AS1-204ENST00000523789 543 ntTSL 2 BASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 DHDDS-216ENST00000525682 1235 ntTSL 2 BASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 SLC25A3-212ENST00000549338 1285 ntAPPRIS ALT1 TSL 3 BASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 AC019254.1-202ENST00000558515 645 ntTSL 3 BASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 AC137932.2-201ENST00000562995 1205 ntTSL 2 BASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 AL356423.1-201ENST00000604953 538 ntBASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 AL731555.1-201ENST00000634547 1259 ntBASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 FAM45BP-202ENST00000592932 1624 ntBASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 CC2D1A-208ENST00000589606 3117 ntAPPRIS ALT1 TSL 1 (best) BASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 PSMC4-201ENST00000157812 1591 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 CNMD-201ENST00000377962 1410 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 HTR3E-206ENST00000440596 1449 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 AC026202.1-201ENST00000443087 585 ntTSL 4 BASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 GPAT2P2-201ENST00000445404 863 ntBASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 AC007690.1-201ENST00000451924 468 ntBASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 RN7SL255P-201ENST00000470639 296 ntBASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 LSS-211ENST00000522411 2523 ntTSL 2 BASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 CARS-214ENST00000529772 2637 ntTSL 2 BASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 PAK1-215ENST00000530617 3001 ntTSL 2 BASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 UEVLD-213ENST00000543987 2503 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 AL354993.2-201ENST00000558738 542 ntTSL 4 BASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 NECTIN2-201ENST00000252483 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 MYT1-205ENST00000622439 2140 ntTSL 5 BASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 PNLIPRP2-201ENST00000579578 1482 ntAPPRIS P5 TSL 2 BASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 LYPD4-201ENST00000343055 1051 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 SNORA52-201ENST00000362915 134 ntBASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 ZNF451-205ENST00000370710 375 ntTSL 2 BASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 IGKV6-21-201ENST00000390256 406 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 AGAP13P-201ENST00000417888 363 ntBASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 AC009237.11-201ENST00000425635 265 ntBASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 TRGV2-201ENST00000426402 544 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 AC087163.1-201ENST00000430089 381 ntBASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 DDTP1-201ENST00000443589 383 ntBASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 AC018892.1-201ENST00000451098 265 ntBASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 PFN1P10-201ENST00000455962 327 ntBASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 FLNC-AS1-201ENST00000469965 559 ntTSL 4 BASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 CACNA1C-IT3-201ENST00000542680 622 ntTSL 3 BASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 HNRNPA1P69-201ENST00000552536 933 ntBASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 LYPD4-202ENST00000601246 1076 ntTSL 5 BASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 AL353626.2-201ENST00000615372 130 ntBASIC8.62□□□□□ -1.03
VPS13DQ5THJ4 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms