Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC14.91□□□□□ -0.02
GPC3P51654 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC14.91□□□□□ -0.02
GPC3P51654 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
GPC3P51654 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
GPC3P51654 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
GPC3P51654 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
GPC3P51654 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC14.91□□□□□ -0.02
GPC3P51654 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GPC3P51654 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GPC3P51654 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GPC3P51654 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GPC3P51654 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
GPC3P51654 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GPC3P51654 PXK-210ENST00000479241 2817 ntTSL 2 BASIC14.9□□□□□ -0.02
GPC3P51654 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GPC3P51654 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
GPC3P51654 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
GPC3P51654 CARS-214ENST00000529772 2637 ntTSL 2 BASIC14.9□□□□□ -0.02
GPC3P51654 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GPC3P51654 MEG8-221ENST00000636391 2155 ntTSL 5 BASIC14.9□□□□□ -0.02
GPC3P51654 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GPC3P51654 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GPC3P51654 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC14.9□□□□□ -0.02
GPC3P51654 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
GPC3P51654 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC14.9□□□□□ -0.02
GPC3P51654 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
GPC3P51654 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC14.9□□□□□ -0.02
GPC3P51654 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC14.9□□□□□ -0.02
GPC3P51654 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC14.9□□□□□ -0.02
GPC3P51654 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC14.9□□□□□ -0.02
GPC3P51654 AL929302.1-201ENST00000426556 871 ntBASIC14.9□□□□□ -0.02
GPC3P51654 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC14.9□□□□□ -0.02
GPC3P51654 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC14.9□□□□□ -0.02
GPC3P51654 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
GPC3P51654 AC025594.1-201ENST00000469533 543 ntBASIC14.9□□□□□ -0.02
GPC3P51654 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC14.9□□□□□ -0.02
GPC3P51654 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC14.9□□□□□ -0.02
GPC3P51654 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC14.9□□□□□ -0.02
GPC3P51654 KNOP1P1-201ENST00000542108 989 ntBASIC14.9□□□□□ -0.02
GPC3P51654 BCDIN3D-AS1-202ENST00000549124 468 ntTSL 3 BASIC14.9□□□□□ -0.02
GPC3P51654 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC14.9□□□□□ -0.02
GPC3P51654 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
GPC3P51654 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC14.9□□□□□ -0.02
GPC3P51654 RN7SL605P-201ENST00000577229 281 ntBASIC14.9□□□□□ -0.02
GPC3P51654 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC14.9□□□□□ -0.02
GPC3P51654 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.9□□□□□ -0.02
GPC3P51654 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GPC3P51654 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC14.9□□□□□ -0.02
GPC3P51654 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GPC3P51654 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
GPC3P51654 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
GPC3P51654 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
GPC3P51654 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
GPC3P51654 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GPC3P51654 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
GPC3P51654 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GPC3P51654 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GPC3P51654 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC14.89□□□□□ -0.03
GPC3P51654 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GPC3P51654 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GPC3P51654 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
GPC3P51654 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
GPC3P51654 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GPC3P51654 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
GPC3P51654 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
GPC3P51654 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GPC3P51654 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
GPC3P51654 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
GPC3P51654 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
GPC3P51654 PPP2R2C-204ENST00000506140 1780 ntTSL 2 BASIC14.89□□□□□ -0.03
GPC3P51654 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GPC3P51654 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
GPC3P51654 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC14.89□□□□□ -0.03
GPC3P51654 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.89□□□□□ -0.03
GPC3P51654 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
GPC3P51654 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
GPC3P51654 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GPC3P51654 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC14.89□□□□□ -0.03
GPC3P51654 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
GPC3P51654 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GPC3P51654 CD37-203ENST00000426897 1204 ntTSL 2 BASIC14.89□□□□□ -0.03
GPC3P51654 AL359979.2-201ENST00000435108 613 ntTSL 3 BASIC14.89□□□□□ -0.03
GPC3P51654 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC14.89□□□□□ -0.03
GPC3P51654 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC14.89□□□□□ -0.03
GPC3P51654 RBM4-207ENST00000506523 654 ntTSL 3 BASIC14.89□□□□□ -0.03
GPC3P51654 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC14.89□□□□□ -0.03
GPC3P51654 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC14.89□□□□□ -0.03
GPC3P51654 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC14.89□□□□□ -0.03
GPC3P51654 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC14.89□□□□□ -0.03
GPC3P51654 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC14.89□□□□□ -0.03
GPC3P51654 AC007998.2-201ENST00000589258 455 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
GPC3P51654 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC14.89□□□□□ -0.03
GPC3P51654 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
GPC3P51654 MEP1AP1-201ENST00000636082 1097 ntBASIC14.89□□□□□ -0.03
GPC3P51654 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
GPC3P51654 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
GPC3P51654 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
GPC3P51654 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
GPC3P51654 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
GPC3P51654 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms