Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SSR1P43307 KDM2A-210ENST00000529006 6967 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SSR1P43307 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC14.56□□□□□ -0.08
SSR1P43307 TMEM169-202ENST00000406027 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SSR1P43307 AF013593.1-201ENST00000458074 1487 ntBASIC14.56□□□□□ -0.08
SSR1P43307 FZD7-201ENST00000286201 3859 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
SSR1P43307 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SSR1P43307 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
SSR1P43307 PXK-210ENST00000479241 2817 ntTSL 2 BASIC14.56□□□□□ -0.08
SSR1P43307 PNPO-217ENST00000642017 3465 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
SSR1P43307 IP6K1-202ENST00000395238 4117 ntTSL 3 BASIC14.56□□□□□ -0.08
SSR1P43307 HLCS-207ENST00000612277 6112 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
SSR1P43307 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSR1P43307 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC14.55□□□□□ -0.08
SSR1P43307 SYDE1-203ENST00000600252 3832 ntTSL 2 BASIC14.55□□□□□ -0.08
SSR1P43307 AL135960.1-201ENST00000422216 4036 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SSR1P43307 AXIN2-209ENST00000618960 4060 ntTSL 5 BASIC14.55□□□□□ -0.08
SSR1P43307 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC14.55□□□□□ -0.08
SSR1P43307 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSR1P43307 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSR1P43307 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
SSR1P43307 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
SSR1P43307 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SSR1P43307 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSR1P43307 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSR1P43307 BANF1P3-201ENST00000412556 261 ntBASIC14.55□□□□□ -0.08
SSR1P43307 FNTAP2-201ENST00000430308 634 ntBASIC14.55□□□□□ -0.08
SSR1P43307 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC14.55□□□□□ -0.08
SSR1P43307 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC14.55□□□□□ -0.08
SSR1P43307 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SSR1P43307 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SSR1P43307 AC091804.1-201ENST00000486888 567 ntBASIC14.55□□□□□ -0.08
SSR1P43307 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC14.55□□□□□ -0.08
SSR1P43307 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
SSR1P43307 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC14.55□□□□□ -0.08
SSR1P43307 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC14.55□□□□□ -0.08
SSR1P43307 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC14.55□□□□□ -0.08
SSR1P43307 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SSR1P43307 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
SSR1P43307 MIR6752-201ENST00000618442 71 ntBASIC14.55□□□□□ -0.08
SSR1P43307 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSR1P43307 TUBBP5-203ENST00000508529 1334 ntBASIC14.55□□□□□ -0.08
SSR1P43307 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC14.55□□□□□ -0.08
SSR1P43307 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
SSR1P43307 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.55□□□□□ -0.08
SSR1P43307 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SSR1P43307 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSR1P43307 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC14.55□□□□□ -0.08
SSR1P43307 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC14.55□□□□□ -0.08
SSR1P43307 KRT8P18-201ENST00000413425 1445 ntBASIC14.55□□□□□ -0.08
SSR1P43307 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC14.55□□□□□ -0.08
SSR1P43307 AP002761.4-201ENST00000565433 3361 ntBASIC14.55□□□□□ -0.08
SSR1P43307 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SSR1P43307 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSR1P43307 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SSR1P43307 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSR1P43307 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC14.55□□□□□ -0.08
SSR1P43307 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC14.55□□□□□ -0.08
SSR1P43307 NRADDP-202ENST00000641269 1585 ntBASIC14.55□□□□□ -0.08
SSR1P43307 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
SSR1P43307 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSR1P43307 FLT4-212ENST00000619105 3806 ntTSL 5 BASIC14.55□□□□□ -0.08
SSR1P43307 RNF24-201ENST00000336095 7453 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSR1P43307 ZNF646-201ENST00000300850 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSR1P43307 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SSR1P43307 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
SSR1P43307 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SSR1P43307 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC14.54□□□□□ -0.08
SSR1P43307 AL031719.1-201ENST00000623365 2587 ntBASIC14.54□□□□□ -0.08
SSR1P43307 FRMD1-205ENST00000440994 2857 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
SSR1P43307 POC1B-GALNT4-202ENST00000548729 5436 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
SSR1P43307 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SSR1P43307 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SSR1P43307 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SSR1P43307 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
SSR1P43307 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
SSR1P43307 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SSR1P43307 ACTG1P2-201ENST00000415776 1125 ntBASIC14.54□□□□□ -0.08
SSR1P43307 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC14.54□□□□□ -0.08
SSR1P43307 ACTG1P11-201ENST00000425411 1125 ntBASIC14.54□□□□□ -0.08
SSR1P43307 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC14.54□□□□□ -0.08
SSR1P43307 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC14.54□□□□□ -0.08
SSR1P43307 NAGK-204ENST00000443872 878 ntTSL 3 BASIC14.54□□□□□ -0.08
SSR1P43307 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC14.54□□□□□ -0.08
SSR1P43307 RN7SL11P-201ENST00000471305 293 ntBASIC14.54□□□□□ -0.08
SSR1P43307 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SSR1P43307 EMC4-209ENST00000559421 497 ntTSL 2 BASIC14.54□□□□□ -0.08
SSR1P43307 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC14.54□□□□□ -0.08
SSR1P43307 CENPX-208ENST00000584347 799 ntTSL 2 BASIC14.54□□□□□ -0.08
SSR1P43307 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
SSR1P43307 AL109837.1-201ENST00000603272 613 ntBASIC14.54□□□□□ -0.08
SSR1P43307 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC14.54□□□□□ -0.08
SSR1P43307 MEG3_2.1-201ENST00000611456 105 ntBASIC14.54□□□□□ -0.08
SSR1P43307 AC244452.3-201ENST00000636814 210 ntBASIC14.54□□□□□ -0.08
SSR1P43307 HS6ST1-201ENST00000259241 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SSR1P43307 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SSR1P43307 KRT18P9-201ENST00000604826 1300 ntBASIC14.54□□□□□ -0.08
SSR1P43307 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SSR1P43307 RGS6-201ENST00000343854 5342 ntTSL 5 BASIC14.54□□□□□ -0.08
SSR1P43307 AC008040.5-201ENST00000599781 1781 ntBASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms