Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 CYP4F23P-201ENST00000593402 1579 ntBASIC15.48■□□□□ 0.07
CLCN1P35523 RAB43-204ENST00000393307 4203 ntAPPRIS P1 TSL 4 BASIC15.48■□□□□ 0.07
CLCN1P35523 AC011511.5-201ENST00000589379 3219 ntBASIC15.48■□□□□ 0.07
CLCN1P35523 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN1P35523 NFIX-201ENST00000358552 1727 ntTSL 5 BASIC15.48■□□□□ 0.07
CLCN1P35523 CEP63-204ENST00000383229 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN1P35523 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
CLCN1P35523 SEPT9-204ENST00000427180 3635 ntTSL 2 BASIC15.48■□□□□ 0.07
CLCN1P35523 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN1P35523 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLCN1P35523 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC15.48■□□□□ 0.07
CLCN1P35523 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLCN1P35523 DDR1-238ENST00000446312 3202 ntTSL 5 BASIC15.47■□□□□ 0.07
CLCN1P35523 RBFOX1-208ENST00000547372 3524 ntTSL 5 BASIC15.47■□□□□ 0.07
CLCN1P35523 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CLCN1P35523 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLCN1P35523 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC15.47■□□□□ 0.07
CLCN1P35523 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC15.47■□□□□ 0.07
CLCN1P35523 HERC6-203ENST00000380265 3781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLCN1P35523 LINC01122-207ENST00000452840 4077 ntTSL 5 BASIC15.47■□□□□ 0.07
CLCN1P35523 SLC26A8-202ENST00000394602 3144 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CLCN1P35523 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC15.47■□□□□ 0.07
CLCN1P35523 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CLCN1P35523 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLCN1P35523 TIAM2-201ENST00000275246 2491 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CLCN1P35523 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLCN1P35523 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
CLCN1P35523 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CLCN1P35523 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC15.47■□□□□ 0.07
CLCN1P35523 MAGED2-207ENST00000396224 2026 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
CLCN1P35523 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CLCN1P35523 TUBB2BP1-201ENST00000404155 871 ntBASIC15.47■□□□□ 0.07
CLCN1P35523 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC15.47■□□□□ 0.07
CLCN1P35523 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CLCN1P35523 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CLCN1P35523 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC15.47■□□□□ 0.07
CLCN1P35523 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.47■□□□□ 0.07
CLCN1P35523 YY1P1-201ENST00000427625 668 ntBASIC15.47■□□□□ 0.07
CLCN1P35523 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.47■□□□□ 0.07
CLCN1P35523 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
CLCN1P35523 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC15.47■□□□□ 0.07
CLCN1P35523 MLF1-209ENST00000482628 1050 ntTSL 5 BASIC15.47■□□□□ 0.07
CLCN1P35523 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC15.47■□□□□ 0.07
CLCN1P35523 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC15.47■□□□□ 0.07
CLCN1P35523 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CLCN1P35523 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.47■□□□□ 0.07
CLCN1P35523 AC107884.1-203ENST00000530846 628 ntTSL 3 BASIC15.47■□□□□ 0.07
CLCN1P35523 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLCN1P35523 AC100827.2-201ENST00000563214 1194 ntBASIC15.47■□□□□ 0.07
CLCN1P35523 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC15.47■□□□□ 0.07
CLCN1P35523 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CLCN1P35523 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15.47■□□□□ 0.07
CLCN1P35523 AC005962.1-201ENST00000584100 773 ntBASIC15.47■□□□□ 0.07
CLCN1P35523 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC15.47■□□□□ 0.07
CLCN1P35523 AC133552.6-201ENST00000613406 534 ntBASIC15.47■□□□□ 0.07
CLCN1P35523 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CLCN1P35523 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CLCN1P35523 C14orf159-203ENST00000412671 2591 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
CLCN1P35523 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC15.47■□□□□ 0.07
CLCN1P35523 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
CLCN1P35523 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CLCN1P35523 GPR156-202ENST00000461057 2525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLCN1P35523 PIGG-203ENST00000453061 3218 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLCN1P35523 Z98885.3-201ENST00000624882 1757 ntBASIC15.47■□□□□ 0.07
CLCN1P35523 LRFN5-201ENST00000298119 3723 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLCN1P35523 OSBP2-203ENST00000403222 3728 ntTSL 5 BASIC15.46■□□□□ 0.07
CLCN1P35523 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC15.46■□□□□ 0.07
CLCN1P35523 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CLCN1P35523 STAT6-203ENST00000537215 2886 ntTSL 2 BASIC15.46■□□□□ 0.07
CLCN1P35523 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
CLCN1P35523 HSPH1-204ENST00000445273 4987 ntTSL 2 BASIC15.46■□□□□ 0.07
CLCN1P35523 DMTF1-201ENST00000331242 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLCN1P35523 RAET1K-202ENST00000533735 1883 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CLCN1P35523 AGAP3-226ENST00000622464 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLCN1P35523 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC15.46■□□□□ 0.07
CLCN1P35523 TSPEAR-203ENST00000613245 3524 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CLCN1P35523 MINK1-203ENST00000453408 3939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLCN1P35523 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLCN1P35523 CACNA2D2-206ENST00000479441 3453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLCN1P35523 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
CLCN1P35523 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLCN1P35523 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLCN1P35523 F2R-201ENST00000319211 3821 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLCN1P35523 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CLCN1P35523 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC15.46■□□□□ 0.07
CLCN1P35523 MIR658-201ENST00000385210 100 ntBASIC15.46■□□□□ 0.07
CLCN1P35523 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLCN1P35523 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
CLCN1P35523 RPSAP36-202ENST00000494591 1261 ntBASIC15.46■□□□□ 0.07
CLCN1P35523 USP9YP2-201ENST00000504503 1000 ntBASIC15.46■□□□□ 0.07
CLCN1P35523 USP9YP1-201ENST00000513521 1002 ntBASIC15.46■□□□□ 0.07
CLCN1P35523 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLCN1P35523 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC15.46■□□□□ 0.07
CLCN1P35523 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLCN1P35523 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CLCN1P35523 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CLCN1P35523 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC15.46■□□□□ 0.07
CLCN1P35523 AC017083.2-201ENST00000608069 979 ntBASIC15.46■□□□□ 0.07
CLCN1P35523 AC009542.2-202ENST00000619004 1067 ntBASIC15.46■□□□□ 0.07
CLCN1P35523 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms