Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
CTLA4P16410 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CTLA4P16410 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CTLA4P16410 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC12.03□□□□□ -0.48
CTLA4P16410 GOLGA8N-205ENST00000569659 1791 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
CTLA4P16410 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
CTLA4P16410 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
CTLA4P16410 FRMD6-203ENST00000395718 4828 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CTLA4P16410 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CTLA4P16410 DNAJB12-202ENST00000394903 3198 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CTLA4P16410 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
CTLA4P16410 TMED7-201ENST00000456936 3757 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CTLA4P16410 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CTLA4P16410 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CTLA4P16410 C9orf170-201ENST00000623052 3239 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CTLA4P16410 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
CTLA4P16410 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CTLA4P16410 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CTLA4P16410 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CTLA4P16410 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC12.03□□□□□ -0.48
CTLA4P16410 AL357079.1-203ENST00000412378 494 ntTSL 5 BASIC12.03□□□□□ -0.48
CTLA4P16410 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CTLA4P16410 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC12.03□□□□□ -0.48
CTLA4P16410 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC12.03□□□□□ -0.48
CTLA4P16410 AC079250.1-201ENST00000456046 531 ntBASIC12.03□□□□□ -0.48
CTLA4P16410 RPL18AP3-201ENST00000462885 528 ntBASIC12.03□□□□□ -0.48
CTLA4P16410 AC025186.1-201ENST00000478174 870 ntBASIC12.03□□□□□ -0.48
CTLA4P16410 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC12.03□□□□□ -0.48
CTLA4P16410 RN7SL81P-201ENST00000493781 261 ntBASIC12.03□□□□□ -0.48
CTLA4P16410 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC12.03□□□□□ -0.48
CTLA4P16410 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC12.03□□□□□ -0.48
CTLA4P16410 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC12.03□□□□□ -0.48
CTLA4P16410 MIR8071-1-201ENST00000616769 65 ntBASIC12.03□□□□□ -0.48
CTLA4P16410 MIR8071-2-201ENST00000616772 65 ntBASIC12.03□□□□□ -0.48
CTLA4P16410 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CTLA4P16410 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC12.03□□□□□ -0.48
CTLA4P16410 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CTLA4P16410 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CTLA4P16410 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC12.03□□□□□ -0.48
CTLA4P16410 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CTLA4P16410 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
CTLA4P16410 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CTLA4P16410 UGT3A1-203ENST00000503189 1902 ntTSL 2 BASIC12.03□□□□□ -0.48
CTLA4P16410 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CTLA4P16410 GPR55-205ENST00000622008 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CTLA4P16410 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CTLA4P16410 AC027369.3-201ENST00000530465 3707 ntBASIC12.03□□□□□ -0.48
CTLA4P16410 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC12.03□□□□□ -0.48
CTLA4P16410 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
CTLA4P16410 SERPING1-203ENST00000378323 1733 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
CTLA4P16410 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CTLA4P16410 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CTLA4P16410 AC007431.1-201ENST00000578662 1412 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CTLA4P16410 IP6K2-201ENST00000328631 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CTLA4P16410 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
CTLA4P16410 RHBDL2-201ENST00000289248 2129 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
CTLA4P16410 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
CTLA4P16410 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
CTLA4P16410 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CTLA4P16410 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CTLA4P16410 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CTLA4P16410 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC12.02□□□□□ -0.48
CTLA4P16410 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC12.02□□□□□ -0.48
CTLA4P16410 TRIM60-201ENST00000341062 1867 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
CTLA4P16410 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CTLA4P16410 SERPINA1-205ENST00000404814 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CTLA4P16410 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
CTLA4P16410 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC12.02□□□□□ -0.49
CTLA4P16410 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CTLA4P16410 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CTLA4P16410 CELP-201ENST00000411440 1249 ntTSL 5 BASIC12.02□□□□□ -0.49
CTLA4P16410 AC073210.1-201ENST00000414799 232 ntBASIC12.02□□□□□ -0.49
CTLA4P16410 GUSBP10-201ENST00000417412 665 ntBASIC12.02□□□□□ -0.49
CTLA4P16410 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CTLA4P16410 AL627422.1-201ENST00000434104 580 ntBASIC12.02□□□□□ -0.49
CTLA4P16410 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC12.02□□□□□ -0.49
CTLA4P16410 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC12.02□□□□□ -0.49
CTLA4P16410 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC12.02□□□□□ -0.49
CTLA4P16410 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CTLA4P16410 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC12.02□□□□□ -0.49
CTLA4P16410 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC12.02□□□□□ -0.49
CTLA4P16410 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC12.02□□□□□ -0.49
CTLA4P16410 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CTLA4P16410 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC12.02□□□□□ -0.49
CTLA4P16410 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC12.02□□□□□ -0.49
CTLA4P16410 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC12.02□□□□□ -0.49
CTLA4P16410 BATF-202ENST00000555504 361 ntTSL 2 BASIC12.02□□□□□ -0.49
CTLA4P16410 HERC2P11-201ENST00000562845 725 ntBASIC12.02□□□□□ -0.49
CTLA4P16410 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC12.02□□□□□ -0.49
CTLA4P16410 AC100756.2-201ENST00000569537 736 ntBASIC12.02□□□□□ -0.49
CTLA4P16410 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CTLA4P16410 AL139099.5-201ENST00000635274 300 ntBASIC12.02□□□□□ -0.49
CTLA4P16410 MLX-203ENST00000435881 2428 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CTLA4P16410 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CTLA4P16410 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CTLA4P16410 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CTLA4P16410 C1QTNF6-201ENST00000337843 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CTLA4P16410 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CTLA4P16410 KRT8P42-201ENST00000405771 1399 ntBASIC12.02□□□□□ -0.49
CTLA4P16410 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms