Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOA4P06727 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC13.64□□□□□ -0.23
APOA4P06727 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOA4P06727 DPP8-201ENST00000300141 3139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOA4P06727 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOA4P06727 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOA4P06727 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC13.64□□□□□ -0.23
APOA4P06727 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
APOA4P06727 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOA4P06727 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
APOA4P06727 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
APOA4P06727 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOA4P06727 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC13.64□□□□□ -0.23
APOA4P06727 AC092573.1-201ENST00000433054 884 ntBASIC13.64□□□□□ -0.23
APOA4P06727 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
APOA4P06727 IL2RG-204ENST00000456850 540 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
APOA4P06727 AC022494.1-201ENST00000466044 728 ntBASIC13.64□□□□□ -0.23
APOA4P06727 RN7SL767P-201ENST00000493013 295 ntBASIC13.64□□□□□ -0.23
APOA4P06727 RN7SL81P-201ENST00000493781 261 ntBASIC13.64□□□□□ -0.23
APOA4P06727 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC13.64□□□□□ -0.23
APOA4P06727 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC13.64□□□□□ -0.23
APOA4P06727 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC13.64□□□□□ -0.23
APOA4P06727 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC13.64□□□□□ -0.23
APOA4P06727 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC13.64□□□□□ -0.23
APOA4P06727 AL049840.2-201ENST00000602722 535 ntBASIC13.64□□□□□ -0.23
APOA4P06727 GARS-210ENST00000627489 324 ntTSL 4 BASIC13.64□□□□□ -0.23
APOA4P06727 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC13.64□□□□□ -0.23
APOA4P06727 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOA4P06727 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
APOA4P06727 SLC35B3-201ENST00000379660 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOA4P06727 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOA4P06727 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
APOA4P06727 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
APOA4P06727 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOA4P06727 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOA4P06727 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
APOA4P06727 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOA4P06727 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
APOA4P06727 SLC4A5-206ENST00000423644 6185 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
APOA4P06727 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
APOA4P06727 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC13.64□□□□□ -0.23
APOA4P06727 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC13.64□□□□□ -0.23
APOA4P06727 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
APOA4P06727 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOA4P06727 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOA4P06727 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC13.63□□□□□ -0.23
APOA4P06727 INHBC-201ENST00000309668 1992 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOA4P06727 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
APOA4P06727 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOA4P06727 GOLGA8UP-201ENST00000527159 1755 ntBASIC13.63□□□□□ -0.23
APOA4P06727 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC13.63□□□□□ -0.23
APOA4P06727 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC13.63□□□□□ -0.23
APOA4P06727 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
APOA4P06727 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
APOA4P06727 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC13.63□□□□□ -0.23
APOA4P06727 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOA4P06727 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOA4P06727 GOLGA2P5-201ENST00000266746 2395 ntBASIC13.63□□□□□ -0.23
APOA4P06727 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOA4P06727 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOA4P06727 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
APOA4P06727 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
APOA4P06727 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC13.63□□□□□ -0.23
APOA4P06727 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOA4P06727 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC13.63□□□□□ -0.23
APOA4P06727 CHCHD2P9-201ENST00000461726 456 ntBASIC13.63□□□□□ -0.23
APOA4P06727 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
APOA4P06727 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOA4P06727 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC13.63□□□□□ -0.23
APOA4P06727 MIR4326-201ENST00000582203 59 ntBASIC13.63□□□□□ -0.23
APOA4P06727 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC13.63□□□□□ -0.23
APOA4P06727 MIR4522-201ENST00000584932 87 ntBASIC13.63□□□□□ -0.23
APOA4P06727 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC13.63□□□□□ -0.23
APOA4P06727 AC051619.9-201ENST00000623237 597 ntBASIC13.63□□□□□ -0.23
APOA4P06727 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC13.63□□□□□ -0.23
APOA4P06727 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC13.63□□□□□ -0.23
APOA4P06727 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOA4P06727 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
APOA4P06727 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
APOA4P06727 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
APOA4P06727 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOA4P06727 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOA4P06727 AC102953.2-201ENST00000609755 3026 ntBASIC13.63□□□□□ -0.23
APOA4P06727 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOA4P06727 OR8J1-202ENST00000533152 1320 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
APOA4P06727 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC13.63□□□□□ -0.23
APOA4P06727 RMND5B-212ENST00000542098 1681 ntTSL 5 BASIC13.63□□□□□ -0.23
APOA4P06727 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
APOA4P06727 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
APOA4P06727 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC13.62□□□□□ -0.23
APOA4P06727 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
APOA4P06727 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
APOA4P06727 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
APOA4P06727 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APOA4P06727 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APOA4P06727 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
APOA4P06727 ODCP-201ENST00000459650 1639 ntBASIC13.62□□□□□ -0.23
APOA4P06727 CBR4-202ENST00000504480 1602 ntTSL 2 BASIC13.62□□□□□ -0.23
APOA4P06727 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC13.62□□□□□ -0.23
APOA4P06727 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms