Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
NACAE9PAV3 LAMB3-201ENST00000356082 4055 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
NACAE9PAV3 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
NACAE9PAV3 AC025183.3-201ENST00000623526 1482 ntBASIC10.05□□□□□ -0.8
NACAE9PAV3 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
NACAE9PAV3 NXPE3-201ENST00000273347 3941 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
NACAE9PAV3 TBC1D22A-203ENST00000380995 3934 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
NACAE9PAV3 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
NACAE9PAV3 CLGN-201ENST00000325617 3043 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
NACAE9PAV3 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC10.05□□□□□ -0.8
NACAE9PAV3 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
NACAE9PAV3 EHMT2-203ENST00000375537 3965 ntAPPRIS P4 TSL 1 (best) BASIC10.05□□□□□ -0.8
NACAE9PAV3 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
NACAE9PAV3 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
NACAE9PAV3 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
NACAE9PAV3 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
NACAE9PAV3 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC10.05□□□□□ -0.8
NACAE9PAV3 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC10.05□□□□□ -0.8
NACAE9PAV3 AC136604.1-202ENST00000425471 771 ntBASIC10.05□□□□□ -0.8
NACAE9PAV3 HNRNPA1P2-207ENST00000432375 960 ntBASIC10.05□□□□□ -0.8
NACAE9PAV3 TUBB8P8-201ENST00000458717 1058 ntBASIC10.05□□□□□ -0.8
NACAE9PAV3 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC10.05□□□□□ -0.8
NACAE9PAV3 SUPT4H1P2-201ENST00000501248 353 ntBASIC10.05□□□□□ -0.8
NACAE9PAV3 SCARNA21-201ENST00000517026 139 ntBASIC10.05□□□□□ -0.8
NACAE9PAV3 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC10.05□□□□□ -0.8
NACAE9PAV3 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC10.05□□□□□ -0.8
NACAE9PAV3 MIR4706-201ENST00000582134 82 ntBASIC10.05□□□□□ -0.8
NACAE9PAV3 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC10.05□□□□□ -0.8
NACAE9PAV3 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
NACAE9PAV3 AL132994.2-201ENST00000603120 687 ntBASIC10.05□□□□□ -0.8
NACAE9PAV3 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC10.05□□□□□ -0.8
NACAE9PAV3 AC128714.1-201ENST00000637035 887 ntBASIC10.05□□□□□ -0.8
NACAE9PAV3 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC10.05□□□□□ -0.8
NACAE9PAV3 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
NACAE9PAV3 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
NACAE9PAV3 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
NACAE9PAV3 AL157791.1-201ENST00000553667 1699 ntBASIC10.05□□□□□ -0.8
NACAE9PAV3 AP002761.4-201ENST00000565433 3361 ntBASIC10.05□□□□□ -0.8
NACAE9PAV3 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
NACAE9PAV3 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
NACAE9PAV3 KRT8P29-201ENST00000420409 1371 ntBASIC10.05□□□□□ -0.8
NACAE9PAV3 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
NACAE9PAV3 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
NACAE9PAV3 AC115284.2-201ENST00000624646 2054 ntBASIC10.05□□□□□ -0.8
NACAE9PAV3 MECP2-201ENST00000303391 10505 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
NACAE9PAV3 GNG7-201ENST00000382159 4208 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
NACAE9PAV3 USP5-201ENST00000229268 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC10.05□□□□□ -0.8
NACAE9PAV3 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC10.05□□□□□ -0.8
NACAE9PAV3 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC10.05□□□□□ -0.8
NACAE9PAV3 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC10.05□□□□□ -0.8
NACAE9PAV3 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
NACAE9PAV3 SLC6A6P1-201ENST00000413933 1850 ntBASIC10.05□□□□□ -0.8
NACAE9PAV3 TMEM178B-202ENST00000565468 10558 ntAPPRIS P2 TSL 5 BASIC10.05□□□□□ -0.8
NACAE9PAV3 TMEM178B-203ENST00000610315 10552 ntAPPRIS ALT1 TSL 5 BASIC10.05□□□□□ -0.8
NACAE9PAV3 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
NACAE9PAV3 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC10.05□□□□□ -0.8
NACAE9PAV3 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC10.05□□□□□ -0.8
NACAE9PAV3 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
NACAE9PAV3 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC10.05□□□□□ -0.8
NACAE9PAV3 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
NACAE9PAV3 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC10.05□□□□□ -0.8
NACAE9PAV3 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
NACAE9PAV3 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC10.05□□□□□ -0.8
NACAE9PAV3 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
NACAE9PAV3 PCDHB19P-202ENST00000625133 2914 ntBASIC10.05□□□□□ -0.8
NACAE9PAV3 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC10.05□□□□□ -0.8
NACAE9PAV3 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
NACAE9PAV3 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC10.05□□□□□ -0.8
NACAE9PAV3 DDR1-224ENST00000376567 3832 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
NACAE9PAV3 MIR33B-201ENST00000385104 96 ntBASIC10.05□□□□□ -0.8
NACAE9PAV3 AC006987.1-201ENST00000413610 527 ntBASIC10.05□□□□□ -0.8
NACAE9PAV3 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC10.05□□□□□ -0.8
NACAE9PAV3 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
NACAE9PAV3 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC10.05□□□□□ -0.8
NACAE9PAV3 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC10.05□□□□□ -0.8
NACAE9PAV3 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC10.05□□□□□ -0.8
NACAE9PAV3 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
NACAE9PAV3 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC10.05□□□□□ -0.8
NACAE9PAV3 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC10.05□□□□□ -0.8
NACAE9PAV3 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
NACAE9PAV3 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC10.05□□□□□ -0.8
NACAE9PAV3 SUN2-202ENST00000405510 4055 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
NACAE9PAV3 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
NACAE9PAV3 ARHGEF2-203ENST00000361247 4149 ntAPPRIS P4 TSL 1 (best) BASIC10.05□□□□□ -0.8
NACAE9PAV3 CAP2P1-201ENST00000557743 1390 ntBASIC10.05□□□□□ -0.8
NACAE9PAV3 FBXW8-202ENST00000455858 4648 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
NACAE9PAV3 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
NACAE9PAV3 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC10.04□□□□□ -0.8
NACAE9PAV3 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC10.04□□□□□ -0.8
NACAE9PAV3 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
NACAE9PAV3 MKRN5P-201ENST00000445263 1467 ntBASIC10.04□□□□□ -0.8
NACAE9PAV3 AC061965.1-201ENST00000560524 1465 ntBASIC10.04□□□□□ -0.8
NACAE9PAV3 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
NACAE9PAV3 AC015818.9-201ENST00000591705 4582 ntBASIC10.04□□□□□ -0.8
NACAE9PAV3 GRM8-201ENST00000339582 4057 ntAPPRIS P3 TSL 5 BASIC10.04□□□□□ -0.8
NACAE9PAV3 SPRED2-201ENST00000356388 4097 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
NACAE9PAV3 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
NACAE9PAV3 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
NACAE9PAV3 LINC01624-203ENST00000607074 3265 ntTSL 2 BASIC10.04□□□□□ -0.8
NACAE9PAV3 PIWIL1-201ENST00000245255 3897 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms