Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 CAP2P1-201ENST00000557743 1390 ntBASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 DNM1P41-201ENST00000623634 3350 ntBASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 MIR1307-201ENST00000408840 149 ntBASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 AL592076.1-201ENST00000424448 303 ntBASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 FTH1P22-201ENST00000456305 520 ntBASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 MIR4265-201ENST00000582152 99 ntBASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 SIGLEC18P-201ENST00000602271 909 ntBASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 GARS-210ENST00000627489 324 ntTSL 4 BASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 AC006453.1-201ENST00000636037 1257 ntBASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 AC060814.4-201ENST00000594169 2163 ntBASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 GHET1-201ENST00000627071 1906 ntBASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 TRPC6-201ENST00000344327 4612 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 SMAD1-215ENST00000515385 2085 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 AC026271.4-201ENST00000578214 1833 ntBASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 AOC4P-203ENST00000566825 2289 ntBASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 HNRNPMP1-201ENST00000560685 1768 ntBASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 AC245140.2-201ENST00000624054 1939 ntBASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 FGFR1-207ENST00000397103 2953 ntTSL 5 BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 NME4-203ENST00000397722 1232 ntTSL 2 BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
HLA-DRB4X5D2U9 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC10.29□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms