Protein–RNA interactions for Protein: Q8WWF5

ZNRF4, E3 ubiquitin-protein ligase ZNRF4, humanhuman

Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF4Q8WWF5 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC12.1□□□□□ -0.47
ZNRF4Q8WWF5 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
ZNRF4Q8WWF5 DUTP3-201ENST00000450025 415 ntBASIC12.1□□□□□ -0.47
ZNRF4Q8WWF5 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC12.1□□□□□ -0.47
ZNRF4Q8WWF5 PDCD2-205ENST00000537445 1114 ntTSL 3 BASIC12.1□□□□□ -0.47
ZNRF4Q8WWF5 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC12.1□□□□□ -0.47
ZNRF4Q8WWF5 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC12.1□□□□□ -0.47
ZNRF4Q8WWF5 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC12.1□□□□□ -0.47
ZNRF4Q8WWF5 AC020914.3-201ENST00000594712 304 ntBASIC12.1□□□□□ -0.47
ZNRF4Q8WWF5 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ZNRF4Q8WWF5 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ZNRF4Q8WWF5 AC006144.1-201ENST00000424220 1600 ntBASIC12.1□□□□□ -0.47
ZNRF4Q8WWF5 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
ZNRF4Q8WWF5 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ZNRF4Q8WWF5 MED16-204ENST00000395808 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZNRF4Q8WWF5 FOSB-203ENST00000443841 3346 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ZNRF4Q8WWF5 ARHGEF3-213ENST00000496106 1994 ntTSL 2 BASIC12.1□□□□□ -0.47
ZNRF4Q8WWF5 HLA-DQB1-202ENST00000399079 1501 ntBASIC12.1□□□□□ -0.47
ZNRF4Q8WWF5 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ZNRF4Q8WWF5 SLC4A5-206ENST00000423644 6185 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
ZNRF4Q8WWF5 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZNRF4Q8WWF5 PYGL-206ENST00000544180 2696 ntTSL 2 BASIC12.1□□□□□ -0.47
ZNRF4Q8WWF5 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZNRF4Q8WWF5 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
ZNRF4Q8WWF5 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZNRF4Q8WWF5 TBC1D3F-201ENST00000620210 2117 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
ZNRF4Q8WWF5 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZNRF4Q8WWF5 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
ZNRF4Q8WWF5 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
ZNRF4Q8WWF5 AC119674.2-203ENST00000642129 1675 ntAPPRIS P5 BASIC12.1□□□□□ -0.47
ZNRF4Q8WWF5 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
ZNRF4Q8WWF5 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC12.09□□□□□ -0.47
ZNRF4Q8WWF5 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC12.09□□□□□ -0.47
ZNRF4Q8WWF5 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC12.09□□□□□ -0.47
ZNRF4Q8WWF5 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
ZNRF4Q8WWF5 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC12.09□□□□□ -0.47
ZNRF4Q8WWF5 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZNRF4Q8WWF5 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
ZNRF4Q8WWF5 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZNRF4Q8WWF5 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
ZNRF4Q8WWF5 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZNRF4Q8WWF5 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZNRF4Q8WWF5 HCN3-201ENST00000368358 3718 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZNRF4Q8WWF5 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZNRF4Q8WWF5 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ZNRF4Q8WWF5 AC005154.3-201ENST00000419639 1393 ntBASIC12.09□□□□□ -0.47
ZNRF4Q8WWF5 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ZNRF4Q8WWF5 AC099786.2-201ENST00000427892 2203 ntTSL 2 BASIC12.09□□□□□ -0.47
ZNRF4Q8WWF5 STK24-201ENST00000376547 2492 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZNRF4Q8WWF5 GRIK5-202ENST00000301218 3310 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ZNRF4Q8WWF5 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZNRF4Q8WWF5 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
ZNRF4Q8WWF5 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZNRF4Q8WWF5 FAM86MP-201ENST00000340703 885 ntBASIC12.09□□□□□ -0.47
ZNRF4Q8WWF5 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZNRF4Q8WWF5 MIR557-201ENST00000385239 98 ntBASIC12.09□□□□□ -0.47
ZNRF4Q8WWF5 PTPA-217ENST00000434095 870 ntTSL 2 BASIC12.09□□□□□ -0.47
ZNRF4Q8WWF5 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC12.09□□□□□ -0.47
ZNRF4Q8WWF5 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC12.09□□□□□ -0.47
ZNRF4Q8WWF5 SCARNA12-201ENST00000459155 270 ntBASIC12.09□□□□□ -0.47
ZNRF4Q8WWF5 AC012618.1-201ENST00000461223 412 ntBASIC12.09□□□□□ -0.47
ZNRF4Q8WWF5 AC008723.1-201ENST00000506922 207 ntBASIC12.09□□□□□ -0.47
ZNRF4Q8WWF5 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
ZNRF4Q8WWF5 PIGCP1-201ENST00000527583 895 ntBASIC12.09□□□□□ -0.47
ZNRF4Q8WWF5 RERG-205ENST00000537647 935 ntTSL 2 BASIC12.09□□□□□ -0.47
ZNRF4Q8WWF5 PUDP-206ENST00000540122 825 ntTSL 2 BASIC12.09□□□□□ -0.47
ZNRF4Q8WWF5 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC12.09□□□□□ -0.47
ZNRF4Q8WWF5 AL137779.3-201ENST00000553295 729 ntBASIC12.09□□□□□ -0.47
ZNRF4Q8WWF5 STUB1-204ENST00000564370 875 ntTSL 2 BASIC12.09□□□□□ -0.47
ZNRF4Q8WWF5 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC12.09□□□□□ -0.47
ZNRF4Q8WWF5 NAT9-220ENST00000582870 896 ntTSL 5 BASIC12.09□□□□□ -0.47
ZNRF4Q8WWF5 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC12.09□□□□□ -0.47
ZNRF4Q8WWF5 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC12.09□□□□□ -0.47
ZNRF4Q8WWF5 IRF3-215ENST00000596822 823 ntTSL 3 BASIC12.09□□□□□ -0.47
ZNRF4Q8WWF5 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC12.09□□□□□ -0.47
ZNRF4Q8WWF5 AC243960.2-201ENST00000600996 747 ntBASIC12.09□□□□□ -0.47
ZNRF4Q8WWF5 AL008721.1-201ENST00000609964 604 ntBASIC12.09□□□□□ -0.47
ZNRF4Q8WWF5 MIR6869-201ENST00000619434 62 ntBASIC12.09□□□□□ -0.47
ZNRF4Q8WWF5 HACD3-201ENST00000261875 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZNRF4Q8WWF5 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ZNRF4Q8WWF5 FBXO5-201ENST00000229758 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZNRF4Q8WWF5 ATG7-213ENST00000446450 2042 ntTSL 2 BASIC12.09□□□□□ -0.47
ZNRF4Q8WWF5 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZNRF4Q8WWF5 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZNRF4Q8WWF5 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC12.09□□□□□ -0.47
ZNRF4Q8WWF5 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ZNRF4Q8WWF5 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
ZNRF4Q8WWF5 RBPJ-203ENST00000345843 1682 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ZNRF4Q8WWF5 S1PR1-201ENST00000305352 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZNRF4Q8WWF5 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
ZNRF4Q8WWF5 HMGB1-202ENST00000339872 2319 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
ZNRF4Q8WWF5 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
ZNRF4Q8WWF5 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZNRF4Q8WWF5 PES1-205ENST00000405677 2708 ntTSL 2 BASIC12.09□□□□□ -0.47
ZNRF4Q8WWF5 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC12.09□□□□□ -0.47
ZNRF4Q8WWF5 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZNRF4Q8WWF5 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC12.09□□□□□ -0.47
ZNRF4Q8WWF5 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
ZNRF4Q8WWF5 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
ZNRF4Q8WWF5 LIN28B-203ENST00000637759 2635 ntTSL 5 BASIC12.08□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms