Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
VPS8Q8N3P4 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VPS8Q8N3P4 RORC-201ENST00000318247 2180 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
VPS8Q8N3P4 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
VPS8Q8N3P4 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
VPS8Q8N3P4 EHMT2-203ENST00000375537 3965 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
VPS8Q8N3P4 NFIX-201ENST00000358552 1727 ntTSL 5 BASIC20.71■□□□□ 0.91
VPS8Q8N3P4 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VPS8Q8N3P4 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC20.71■□□□□ 0.91
VPS8Q8N3P4 LINC01801-202ENST00000590963 2077 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
VPS8Q8N3P4 KIZ-208ENST00000616848 1875 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.91
VPS8Q8N3P4 AC009133.3-201ENST00000565600 1656 ntTSL 5 BASIC20.7■□□□□ 0.91
VPS8Q8N3P4 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
VPS8Q8N3P4 SNORA57-201ENST00000383870 149 ntBASIC20.7■□□□□ 0.9
VPS8Q8N3P4 OR7E37P-201ENST00000421076 897 ntBASIC20.7■□□□□ 0.9
VPS8Q8N3P4 FDPSP7-201ENST00000429043 1054 ntBASIC20.7■□□□□ 0.9
VPS8Q8N3P4 PDLIM2-212ENST00000443561 701 ntTSL 2 BASIC20.7■□□□□ 0.9
VPS8Q8N3P4 AL137078.1-201ENST00000446280 404 ntTSL 2 BASIC20.7■□□□□ 0.9
VPS8Q8N3P4 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC20.7■□□□□ 0.9
VPS8Q8N3P4 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
VPS8Q8N3P4 AC022211.3-201ENST00000584339 400 ntTSL 3 BASIC20.7■□□□□ 0.9
VPS8Q8N3P4 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC20.7■□□□□ 0.9
VPS8Q8N3P4 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC20.7■□□□□ 0.9
VPS8Q8N3P4 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VPS8Q8N3P4 EVA1A-201ENST00000233712 1815 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
VPS8Q8N3P4 RUSC1-AS1-202ENST00000446880 1836 ntTSL 2 BASIC20.7■□□□□ 0.9
VPS8Q8N3P4 IL18BP-202ENST00000337131 1606 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
VPS8Q8N3P4 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
VPS8Q8N3P4 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VPS8Q8N3P4 ZP4-201ENST00000366570 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VPS8Q8N3P4 SNRPN-205ENST00000400100 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VPS8Q8N3P4 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
VPS8Q8N3P4 DRD2-208ENST00000542968 2467 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
VPS8Q8N3P4 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
VPS8Q8N3P4 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
VPS8Q8N3P4 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VPS8Q8N3P4 DPP8-201ENST00000300141 3139 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VPS8Q8N3P4 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VPS8Q8N3P4 HRC-203ENST00000595625 2044 ntTSL 5 BASIC20.7■□□□□ 0.9
VPS8Q8N3P4 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
VPS8Q8N3P4 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
VPS8Q8N3P4 HYLS1-201ENST00000356438 1810 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
VPS8Q8N3P4 TAF11-202ENST00000420584 1465 ntTSL 2 BASIC20.7■□□□□ 0.9
VPS8Q8N3P4 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC20.7■□□□□ 0.9
VPS8Q8N3P4 TACC1-208ENST00000520340 1976 ntTSL 5 BASIC20.7■□□□□ 0.9
VPS8Q8N3P4 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC20.7■□□□□ 0.9
VPS8Q8N3P4 LINC02228-202ENST00000641261 2489 ntBASIC20.7■□□□□ 0.9
VPS8Q8N3P4 FOSB-203ENST00000443841 3346 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
VPS8Q8N3P4 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VPS8Q8N3P4 CA6-201ENST00000377436 942 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
VPS8Q8N3P4 CA6-202ENST00000377442 747 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
VPS8Q8N3P4 CMTM5-204ENST00000382809 378 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
VPS8Q8N3P4 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
VPS8Q8N3P4 FAM178B-201ENST00000393526 1004 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
VPS8Q8N3P4 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC20.7■□□□□ 0.9
VPS8Q8N3P4 CHN2-214ENST00000439711 755 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
VPS8Q8N3P4 FHIT-205ENST00000476844 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VPS8Q8N3P4 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC20.7■□□□□ 0.9
VPS8Q8N3P4 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC20.7■□□□□ 0.9
VPS8Q8N3P4 AP003108.1-201ENST00000534856 554 ntTSL 4 BASIC20.7■□□□□ 0.9
VPS8Q8N3P4 AC117500.5-201ENST00000623233 527 ntBASIC20.7■□□□□ 0.9
VPS8Q8N3P4 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VPS8Q8N3P4 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VPS8Q8N3P4 KRT40-202ENST00000398486 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VPS8Q8N3P4 LILRB4-205ENST00000430952 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
VPS8Q8N3P4 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
VPS8Q8N3P4 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VPS8Q8N3P4 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
VPS8Q8N3P4 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VPS8Q8N3P4 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
VPS8Q8N3P4 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
VPS8Q8N3P4 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC20.69■□□□□ 0.9
VPS8Q8N3P4 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VPS8Q8N3P4 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC20.69■□□□□ 0.9
VPS8Q8N3P4 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VPS8Q8N3P4 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC20.69■□□□□ 0.9
VPS8Q8N3P4 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
VPS8Q8N3P4 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
VPS8Q8N3P4 PROP1-201ENST00000308304 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VPS8Q8N3P4 AL121753.2-201ENST00000624581 1461 ntBASIC20.69■□□□□ 0.9
VPS8Q8N3P4 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VPS8Q8N3P4 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
VPS8Q8N3P4 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC20.69■□□□□ 0.9
VPS8Q8N3P4 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC20.69■□□□□ 0.9
VPS8Q8N3P4 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
VPS8Q8N3P4 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
VPS8Q8N3P4 PMF1-201ENST00000368273 884 ntTSL 2 BASIC20.69■□□□□ 0.9
VPS8Q8N3P4 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
VPS8Q8N3P4 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
VPS8Q8N3P4 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC20.69■□□□□ 0.9
VPS8Q8N3P4 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
VPS8Q8N3P4 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC20.69■□□□□ 0.9
VPS8Q8N3P4 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC20.69■□□□□ 0.9
VPS8Q8N3P4 AC109597.2-201ENST00000569407 927 ntTSL 3 BASIC20.69■□□□□ 0.9
VPS8Q8N3P4 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC20.69■□□□□ 0.9
VPS8Q8N3P4 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC20.69■□□□□ 0.9
VPS8Q8N3P4 NOSIP-204ENST00000596358 1005 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
VPS8Q8N3P4 UBA52-214ENST00000599595 692 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
VPS8Q8N3P4 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC20.69■□□□□ 0.9
VPS8Q8N3P4 C3orf56-201ENST00000624688 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms