Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CLDN20P56880 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CLDN20P56880 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CLDN20P56880 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
CLDN20P56880 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CLDN20P56880 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
CLDN20P56880 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CLDN20P56880 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC12.52□□□□□ -0.4
CLDN20P56880 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CLDN20P56880 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC12.52□□□□□ -0.41
CLDN20P56880 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CLDN20P56880 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CLDN20P56880 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CLDN20P56880 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CLDN20P56880 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CLDN20P56880 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC12.52□□□□□ -0.41
CLDN20P56880 AC005722.1-201ENST00000431878 964 ntBASIC12.52□□□□□ -0.41
CLDN20P56880 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CLDN20P56880 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
CLDN20P56880 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC12.52□□□□□ -0.41
CLDN20P56880 AL354861.1-201ENST00000445213 355 ntBASIC12.52□□□□□ -0.41
CLDN20P56880 RN7SL767P-201ENST00000493013 295 ntBASIC12.52□□□□□ -0.41
CLDN20P56880 IQSEC3P1-201ENST00000538799 536 ntBASIC12.52□□□□□ -0.41
CLDN20P56880 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC12.52□□□□□ -0.41
CLDN20P56880 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC12.52□□□□□ -0.41
CLDN20P56880 NUDT4P2-201ENST00000578341 546 ntBASIC12.52□□□□□ -0.41
CLDN20P56880 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC12.52□□□□□ -0.41
CLDN20P56880 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC12.52□□□□□ -0.41
CLDN20P56880 AL049840.2-201ENST00000602722 535 ntBASIC12.52□□□□□ -0.41
CLDN20P56880 SPCS2P2-201ENST00000603270 608 ntBASIC12.52□□□□□ -0.41
CLDN20P56880 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
CLDN20P56880 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC12.52□□□□□ -0.41
CLDN20P56880 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CLDN20P56880 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC12.52□□□□□ -0.41
CLDN20P56880 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CLDN20P56880 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CLDN20P56880 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC12.52□□□□□ -0.41
CLDN20P56880 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CLDN20P56880 MSANTD2P1-201ENST00000445341 1368 ntBASIC12.52□□□□□ -0.41
CLDN20P56880 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
CLDN20P56880 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
CLDN20P56880 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CLDN20P56880 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CLDN20P56880 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CLDN20P56880 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CLDN20P56880 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
CLDN20P56880 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CLDN20P56880 HARS-207ENST00000504156 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CLDN20P56880 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CLDN20P56880 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CLDN20P56880 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CLDN20P56880 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CLDN20P56880 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CLDN20P56880 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC12.52□□□□□ -0.41
CLDN20P56880 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN20P56880 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN20P56880 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC12.51□□□□□ -0.41
CLDN20P56880 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC12.51□□□□□ -0.41
CLDN20P56880 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
CLDN20P56880 AC018445.4-201ENST00000624066 2291 ntBASIC12.51□□□□□ -0.41
CLDN20P56880 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC12.51□□□□□ -0.41
CLDN20P56880 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN20P56880 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN20P56880 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN20P56880 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN20P56880 PES1P2-201ENST00000449745 1735 ntBASIC12.51□□□□□ -0.41
CLDN20P56880 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC12.51□□□□□ -0.41
CLDN20P56880 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC12.51□□□□□ -0.41
CLDN20P56880 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN20P56880 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC12.51□□□□□ -0.41
CLDN20P56880 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC12.51□□□□□ -0.41
CLDN20P56880 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN20P56880 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
CLDN20P56880 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC12.51□□□□□ -0.41
CLDN20P56880 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN20P56880 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN20P56880 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN20P56880 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN20P56880 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN20P56880 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN20P56880 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN20P56880 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN20P56880 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN20P56880 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN20P56880 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN20P56880 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN20P56880 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN20P56880 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN20P56880 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN20P56880 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC12.51□□□□□ -0.41
CLDN20P56880 FXNP2-201ENST00000411625 547 ntBASIC12.51□□□□□ -0.41
CLDN20P56880 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN20P56880 HLA-DPB2-205ENST00000435074 1188 ntBASIC12.51□□□□□ -0.41
CLDN20P56880 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC12.51□□□□□ -0.41
CLDN20P56880 RPL7P35-201ENST00000446943 740 ntBASIC12.51□□□□□ -0.41
CLDN20P56880 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN20P56880 STK24P1-201ENST00000455035 1291 ntBASIC12.51□□□□□ -0.41
CLDN20P56880 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC12.51□□□□□ -0.41
CLDN20P56880 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC12.51□□□□□ -0.41
CLDN20P56880 HINT1-205ENST00000508488 703 ntTSL 2 BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms