Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 DNAJC30-201ENST00000395176 2485 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
SUMO3P55854 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC12.27□□□□□ -0.45
SUMO3P55854 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SUMO3P55854 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SUMO3P55854 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SUMO3P55854 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC12.27□□□□□ -0.45
SUMO3P55854 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
SUMO3P55854 AC021305.1-201ENST00000520656 1514 ntBASIC12.27□□□□□ -0.45
SUMO3P55854 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SUMO3P55854 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
SUMO3P55854 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SUMO3P55854 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SUMO3P55854 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
SUMO3P55854 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC12.26□□□□□ -0.45
SUMO3P55854 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SUMO3P55854 MEG8-221ENST00000636391 2155 ntTSL 5 BASIC12.26□□□□□ -0.45
SUMO3P55854 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
SUMO3P55854 EHMT2-202ENST00000375530 3856 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
SUMO3P55854 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SUMO3P55854 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
SUMO3P55854 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SUMO3P55854 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
SUMO3P55854 PXK-210ENST00000479241 2817 ntTSL 2 BASIC12.26□□□□□ -0.45
SUMO3P55854 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SUMO3P55854 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC12.26□□□□□ -0.45
SUMO3P55854 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
SUMO3P55854 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SUMO3P55854 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SUMO3P55854 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SUMO3P55854 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
SUMO3P55854 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SUMO3P55854 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SUMO3P55854 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SUMO3P55854 DIO1-216ENST00000613679 1856 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
SUMO3P55854 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
SUMO3P55854 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SUMO3P55854 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SUMO3P55854 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SUMO3P55854 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SUMO3P55854 AP000354.1-201ENST00000396982 456 ntBASIC12.26□□□□□ -0.45
SUMO3P55854 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC12.26□□□□□ -0.45
SUMO3P55854 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC12.26□□□□□ -0.45
SUMO3P55854 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC12.26□□□□□ -0.45
SUMO3P55854 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC12.26□□□□□ -0.45
SUMO3P55854 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SUMO3P55854 PPIA-208ENST00000489459 907 ntTSL 2 BASIC12.26□□□□□ -0.45
SUMO3P55854 SLC25A51P3-201ENST00000521814 889 ntBASIC12.26□□□□□ -0.45
SUMO3P55854 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
SUMO3P55854 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC12.26□□□□□ -0.45
SUMO3P55854 DNM1P51-201ENST00000558149 522 ntBASIC12.26□□□□□ -0.45
SUMO3P55854 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC12.26□□□□□ -0.45
SUMO3P55854 AC013553.1-201ENST00000560906 267 ntBASIC12.26□□□□□ -0.45
SUMO3P55854 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC12.26□□□□□ -0.45
SUMO3P55854 AP001120.3-201ENST00000585729 489 ntBASIC12.26□□□□□ -0.45
SUMO3P55854 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC12.26□□□□□ -0.45
SUMO3P55854 FAM90A28P-201ENST00000596881 489 ntTSL 5 BASIC12.26□□□□□ -0.45
SUMO3P55854 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SUMO3P55854 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC12.26□□□□□ -0.45
SUMO3P55854 PPIA-210ENST00000620047 827 ntTSL 5 BASIC12.26□□□□□ -0.45
SUMO3P55854 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
SUMO3P55854 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC12.26□□□□□ -0.45
SUMO3P55854 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
SUMO3P55854 KIF9-208ENST00000452770 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SUMO3P55854 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
SUMO3P55854 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SUMO3P55854 FP325330.2-201ENST00000624219 5630 ntBASIC12.26□□□□□ -0.45
SUMO3P55854 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SUMO3P55854 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SUMO3P55854 KRT8P25-201ENST00000473150 1456 ntBASIC12.26□□□□□ -0.45
SUMO3P55854 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC12.26□□□□□ -0.45
SUMO3P55854 TMEM182-202ENST00000409528 3112 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SUMO3P55854 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
SUMO3P55854 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SUMO3P55854 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SUMO3P55854 TBC1D3P1-201ENST00000590047 1693 ntBASIC12.26□□□□□ -0.45
SUMO3P55854 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC12.25□□□□□ -0.45
SUMO3P55854 AC125807.2-201ENST00000513358 3514 ntBASIC12.25□□□□□ -0.45
SUMO3P55854 CPA5-203ENST00000461828 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SUMO3P55854 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
SUMO3P55854 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SUMO3P55854 AC111188.1-201ENST00000525758 1833 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SUMO3P55854 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
SUMO3P55854 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SUMO3P55854 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SUMO3P55854 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SUMO3P55854 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC12.25□□□□□ -0.45
SUMO3P55854 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC12.25□□□□□ -0.45
SUMO3P55854 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SUMO3P55854 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SUMO3P55854 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
SUMO3P55854 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC12.25□□□□□ -0.45
SUMO3P55854 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
SUMO3P55854 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SUMO3P55854 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SUMO3P55854 MRPS12-202ENST00000402029 929 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SUMO3P55854 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SUMO3P55854 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC12.25□□□□□ -0.45
SUMO3P55854 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SUMO3P55854 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC12.25□□□□□ -0.45
SUMO3P55854 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms