Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 KC6-205ENST00000599934 556 ntTSL 4 BASIC12.91□□□□□ -0.34
CLK1P49759 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLK1P49759 AL157813.1-201ENST00000612996 587 ntBASIC12.91□□□□□ -0.34
CLK1P49759 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
CLK1P49759 AL805961.1-203ENST00000641078 1258 ntBASIC12.91□□□□□ -0.34
CLK1P49759 NAP1L6-202ENST00000641404 1222 ntBASIC12.91□□□□□ -0.34
CLK1P49759 COL11A1-210ENST00000512756 5442 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLK1P49759 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLK1P49759 FAIM2-205ENST00000550890 2094 ntTSL 2 BASIC12.91□□□□□ -0.34
CLK1P49759 PSMD11-201ENST00000261712 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLK1P49759 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC12.91□□□□□ -0.34
CLK1P49759 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC12.91□□□□□ -0.34
CLK1P49759 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CLK1P49759 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC12.91□□□□□ -0.34
CLK1P49759 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CLK1P49759 DYNC1LI1-201ENST00000273130 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLK1P49759 ADNP-203ENST00000396029 6261 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLK1P49759 ESR2-213ENST00000557772 5458 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CLK1P49759 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CLK1P49759 AC138028.6-201ENST00000616106 1482 ntBASIC12.91□□□□□ -0.34
CLK1P49759 CACNA1F-203ENST00000376265 6070 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLK1P49759 USP40-201ENST00000251722 5692 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
CLK1P49759 NBPF1-203ENST00000430580 5932 ntAPPRIS P5 TSL 5 BASIC12.9□□□□□ -0.34
CLK1P49759 C2-209ENST00000452323 1999 ntTSL 2 BASIC12.9□□□□□ -0.34
CLK1P49759 CACNA1C-219ENST00000399649 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLK1P49759 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
CLK1P49759 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CLK1P49759 STK26-204ENST00000481105 1835 ntTSL 2 BASIC12.9□□□□□ -0.34
CLK1P49759 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CLK1P49759 FER1L5-207ENST00000641731 6294 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.34
CLK1P49759 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC12.9□□□□□ -0.34
CLK1P49759 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC12.9□□□□□ -0.34
CLK1P49759 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLK1P49759 CASC4-202ENST00000345795 3764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLK1P49759 PTPRN-202ENST00000409251 3622 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CLK1P49759 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CLK1P49759 KCNH4-202ENST00000607371 3723 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
CLK1P49759 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CLK1P49759 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CLK1P49759 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC12.9□□□□□ -0.34
CLK1P49759 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC12.9□□□□□ -0.34
CLK1P49759 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLK1P49759 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
CLK1P49759 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CLK1P49759 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CLK1P49759 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC12.9□□□□□ -0.34
CLK1P49759 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC12.9□□□□□ -0.34
CLK1P49759 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLK1P49759 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC12.9□□□□□ -0.34
CLK1P49759 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC12.9□□□□□ -0.34
CLK1P49759 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC12.9□□□□□ -0.34
CLK1P49759 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CLK1P49759 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC12.9□□□□□ -0.34
CLK1P49759 AC104758.3-203ENST00000562938 2123 ntBASIC12.9□□□□□ -0.34
CLK1P49759 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC12.9□□□□□ -0.34
CLK1P49759 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC12.9□□□□□ -0.34
CLK1P49759 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC12.9□□□□□ -0.34
CLK1P49759 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLK1P49759 AC026740.1-201ENST00000607068 791 ntBASIC12.9□□□□□ -0.34
CLK1P49759 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC12.9□□□□□ -0.34
CLK1P49759 SIN3A-202ENST00000394947 6737 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLK1P49759 AC006254.1-201ENST00000468472 5640 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CLK1P49759 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
CLK1P49759 EBF2-203ENST00000520164 5145 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CLK1P49759 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CLK1P49759 ZNF236-202ENST00000320610 7124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLK1P49759 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC12.9□□□□□ -0.34
CLK1P49759 ZNF606-201ENST00000341164 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLK1P49759 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CLK1P49759 PITPNM3-202ENST00000421306 6945 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
CLK1P49759 KRT8P21-201ENST00000430398 1491 ntBASIC12.9□□□□□ -0.34
CLK1P49759 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLK1P49759 AC134772.2-202ENST00000634384 3585 ntTSL 2 BASIC12.9□□□□□ -0.34
CLK1P49759 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC12.9□□□□□ -0.35
CLK1P49759 DLGAP2-214ENST00000612087 10088 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.35
CLK1P49759 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC12.9□□□□□ -0.35
CLK1P49759 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLK1P49759 MYRF-201ENST00000265460 5745 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLK1P49759 MYO1D-206ENST00000579584 3500 ntTSL 2 BASIC12.89□□□□□ -0.35
CLK1P49759 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC12.89□□□□□ -0.35
CLK1P49759 CACNA1F-202ENST00000376251 5813 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CLK1P49759 DPYSL5-207ENST00000614712 5128 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CLK1P49759 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLK1P49759 EXOC7-216ENST00000589210 4751 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLK1P49759 GPR179-204ENST00000621958 7983 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
CLK1P49759 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC12.89□□□□□ -0.35
CLK1P49759 PTPRN2-202ENST00000389416 4692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLK1P49759 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLK1P49759 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLK1P49759 SUPT20HL1-201ENST00000436466 2618 ntBASIC12.89□□□□□ -0.35
CLK1P49759 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CLK1P49759 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLK1P49759 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CLK1P49759 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CLK1P49759 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC12.89□□□□□ -0.35
CLK1P49759 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLK1P49759 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CLK1P49759 CRCP-204ENST00000398684 492 ntTSL 2 BASIC12.89□□□□□ -0.35
CLK1P49759 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CLK1P49759 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms