Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC14.22□□□□□ -0.13
SLC1A1P43005 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC1A1P43005 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
SLC1A1P43005 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC1A1P43005 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC1A1P43005 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
SLC1A1P43005 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SLC1A1P43005 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC1A1P43005 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SLC1A1P43005 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SLC1A1P43005 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
SLC1A1P43005 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC1A1P43005 CCDC3-202ENST00000378839 3180 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
SLC1A1P43005 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC1A1P43005 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
SLC1A1P43005 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC1A1P43005 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC14.21□□□□□ -0.13
SLC1A1P43005 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC1A1P43005 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SLC1A1P43005 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
SLC1A1P43005 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SLC1A1P43005 PIGG-205ENST00000503111 2629 ntTSL 2 BASIC14.21□□□□□ -0.13
SLC1A1P43005 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
SLC1A1P43005 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SLC1A1P43005 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC1A1P43005 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC1A1P43005 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC14.21□□□□□ -0.13
SLC1A1P43005 RBM10-206ENST00000628161 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC1A1P43005 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC1A1P43005 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC1A1P43005 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
SLC1A1P43005 TPI1P3-201ENST00000335020 740 ntBASIC14.21□□□□□ -0.13
SLC1A1P43005 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SLC1A1P43005 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC1A1P43005 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC14.21□□□□□ -0.13
SLC1A1P43005 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
SLC1A1P43005 CLIC1-209ENST00000395892 1197 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
SLC1A1P43005 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SLC1A1P43005 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC14.21□□□□□ -0.13
SLC1A1P43005 ERP29P1-201ENST00000442902 706 ntBASIC14.21□□□□□ -0.13
SLC1A1P43005 AC079250.1-201ENST00000456046 531 ntBASIC14.21□□□□□ -0.13
SLC1A1P43005 RPL18AP3-201ENST00000462885 528 ntBASIC14.21□□□□□ -0.13
SLC1A1P43005 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC14.21□□□□□ -0.13
SLC1A1P43005 AC092658.1-201ENST00000505836 891 ntBASIC14.21□□□□□ -0.13
SLC1A1P43005 AC093300.1-201ENST00000510368 1201 ntBASIC14.21□□□□□ -0.13
SLC1A1P43005 PIGCP1-201ENST00000527583 895 ntBASIC14.21□□□□□ -0.13
SLC1A1P43005 TMEM106A-201ENST00000536052 1181 ntTSL 2 BASIC14.21□□□□□ -0.13
SLC1A1P43005 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC14.21□□□□□ -0.13
SLC1A1P43005 AC138701.2-201ENST00000553634 226 ntBASIC14.21□□□□□ -0.13
SLC1A1P43005 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC14.21□□□□□ -0.13
SLC1A1P43005 AC011481.3-201ENST00000623895 5594 ntBASIC14.21□□□□□ -0.13
SLC1A1P43005 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SLC1A1P43005 C9orf170-201ENST00000623052 3239 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SLC1A1P43005 TRPV1-201ENST00000310522 2340 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SLC1A1P43005 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SLC1A1P43005 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SLC1A1P43005 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
SLC1A1P43005 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SLC1A1P43005 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.21□□□□□ -0.14
SLC1A1P43005 FTO-214ENST00000636218 2227 ntTSL 5 BASIC14.21□□□□□ -0.14
SLC1A1P43005 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SLC1A1P43005 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC1A1P43005 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC14.2□□□□□ -0.14
SLC1A1P43005 FBLN1-208ENST00000442170 2531 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SLC1A1P43005 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC1A1P43005 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC1A1P43005 RHBDL2-201ENST00000289248 2129 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SLC1A1P43005 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC1A1P43005 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
SLC1A1P43005 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SLC1A1P43005 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC1A1P43005 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC1A1P43005 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC1A1P43005 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
SLC1A1P43005 CSTF2-203ENST00000415585 2074 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SLC1A1P43005 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SLC1A1P43005 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC1A1P43005 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC14.2□□□□□ -0.14
SLC1A1P43005 RPL8P2-201ENST00000430538 502 ntBASIC14.2□□□□□ -0.14
SLC1A1P43005 MYOZ3-205ENST00000520112 605 ntTSL 4 BASIC14.2□□□□□ -0.14
SLC1A1P43005 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC14.2□□□□□ -0.14
SLC1A1P43005 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC14.2□□□□□ -0.14
SLC1A1P43005 MIR4687-201ENST00000583618 80 ntBASIC14.2□□□□□ -0.14
SLC1A1P43005 AL009176.1-201ENST00000607876 650 ntBASIC14.2□□□□□ -0.14
SLC1A1P43005 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC14.2□□□□□ -0.14
SLC1A1P43005 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC1A1P43005 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SLC1A1P43005 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC1A1P43005 TBC1D3J-201ENST00000620719 1426 ntBASIC14.2□□□□□ -0.14
SLC1A1P43005 Z97653.2-201ENST00000623057 1418 ntBASIC14.2□□□□□ -0.14
SLC1A1P43005 AC117503.4-201ENST00000623229 1418 ntBASIC14.2□□□□□ -0.14
SLC1A1P43005 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
SLC1A1P43005 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC1A1P43005 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SLC1A1P43005 CES1P1-201ENST00000421606 1704 ntBASIC14.2□□□□□ -0.14
SLC1A1P43005 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SLC1A1P43005 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC1A1P43005 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SLC1A1P43005 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SLC1A1P43005 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms