Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDE6BP35913 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC16.5■□□□□ 0.23
PDE6BP35913 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
PDE6BP35913 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDE6BP35913 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC16.5■□□□□ 0.23
PDE6BP35913 KIR2DL4-203ENST00000357494 1396 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PDE6BP35913 TRIP12-205ENST00000409677 1507 ntTSL 2 BASIC16.5■□□□□ 0.23
PDE6BP35913 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDE6BP35913 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.5■□□□□ 0.23
PDE6BP35913 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDE6BP35913 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PDE6BP35913 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PDE6BP35913 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PDE6BP35913 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PDE6BP35913 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC16.49■□□□□ 0.23
PDE6BP35913 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PDE6BP35913 IP6K2-211ENST00000432678 1309 ntTSL 2 BASIC16.49■□□□□ 0.23
PDE6BP35913 FKBP4P1-201ENST00000507284 1347 ntBASIC16.49■□□□□ 0.23
PDE6BP35913 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PDE6BP35913 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PDE6BP35913 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
PDE6BP35913 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC16.49■□□□□ 0.23
PDE6BP35913 ELMOD3-201ENST00000315658 2685 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PDE6BP35913 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PDE6BP35913 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PDE6BP35913 LINC00910-201ENST00000341011 2303 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PDE6BP35913 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PDE6BP35913 C20orf141-201ENST00000380589 730 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PDE6BP35913 LINC02036-201ENST00000415869 910 ntTSL 3 BASIC16.49■□□□□ 0.23
PDE6BP35913 LINC01833-204ENST00000444871 581 ntTSL 3 BASIC16.49■□□□□ 0.23
PDE6BP35913 AC104623.1-201ENST00000446357 546 ntTSL 4 BASIC16.49■□□□□ 0.23
PDE6BP35913 TCEA3-204ENST00000461794 713 ntTSL 3 BASIC16.49■□□□□ 0.23
PDE6BP35913 SMIM14-205ENST00000511809 830 ntTSL 2 BASIC16.49■□□□□ 0.23
PDE6BP35913 HNRNPA1P72-201ENST00000529511 967 ntBASIC16.49■□□□□ 0.23
PDE6BP35913 TMEM106A-201ENST00000536052 1181 ntTSL 2 BASIC16.49■□□□□ 0.23
PDE6BP35913 AC025265.3-201ENST00000550175 468 ntTSL 3 BASIC16.49■□□□□ 0.23
PDE6BP35913 AC104759.1-201ENST00000559109 939 ntBASIC16.49■□□□□ 0.23
PDE6BP35913 AC120498.5-201ENST00000561757 299 ntBASIC16.49■□□□□ 0.23
PDE6BP35913 SMIM22-206ENST00000589327 629 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
PDE6BP35913 LINC02427-202ENST00000605270 1059 ntTSL 2 BASIC16.49■□□□□ 0.23
PDE6BP35913 RN7SL341P-201ENST00000613745 298 ntBASIC16.49■□□□□ 0.23
PDE6BP35913 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PDE6BP35913 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PDE6BP35913 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PDE6BP35913 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PDE6BP35913 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PDE6BP35913 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.49■□□□□ 0.23
PDE6BP35913 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC16.49■□□□□ 0.23
PDE6BP35913 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PDE6BP35913 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PDE6BP35913 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PDE6BP35913 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PDE6BP35913 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PDE6BP35913 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PDE6BP35913 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC16.48■□□□□ 0.23
PDE6BP35913 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDE6BP35913 LINC00337-201ENST00000429480 1302 ntTSL 2 BASIC16.48■□□□□ 0.23
PDE6BP35913 CD9-212ENST00000610354 1315 ntTSL 5 BASIC16.48■□□□□ 0.23
PDE6BP35913 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDE6BP35913 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PDE6BP35913 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDE6BP35913 SEPT4-223ENST00000583114 1709 ntTSL 2 BASIC16.48■□□□□ 0.23
PDE6BP35913 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDE6BP35913 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
PDE6BP35913 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PDE6BP35913 FAM183BP-201ENST00000409072 1595 ntBASIC16.48■□□□□ 0.23
PDE6BP35913 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDE6BP35913 AC020917.4-201ENST00000623994 1999 ntBASIC16.48■□□□□ 0.23
PDE6BP35913 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDE6BP35913 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDE6BP35913 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC16.48■□□□□ 0.23
PDE6BP35913 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDE6BP35913 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.48■□□□□ 0.23
PDE6BP35913 FCRLA-202ENST00000294796 766 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PDE6BP35913 OR2T27-201ENST00000344889 954 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
PDE6BP35913 PPP1R2P10-201ENST00000393023 595 ntBASIC16.48■□□□□ 0.23
PDE6BP35913 AC004910.1-201ENST00000433493 787 ntBASIC16.48■□□□□ 0.23
PDE6BP35913 Z84721.1-201ENST00000438841 372 ntBASIC16.48■□□□□ 0.23
PDE6BP35913 LINC00299-203ENST00000444688 537 ntTSL 4 BASIC16.48■□□□□ 0.23
PDE6BP35913 AC022201.1-201ENST00000452525 577 ntTSL 4 BASIC16.48■□□□□ 0.23
PDE6BP35913 RN7SL16P-201ENST00000476316 269 ntBASIC16.48■□□□□ 0.23
PDE6BP35913 VAMP2-203ENST00000481878 557 ntAPPRIS ALT1 TSL 2 BASIC16.48■□□□□ 0.23
PDE6BP35913 AC139795.1-201ENST00000499314 838 ntTSL 5 BASIC16.48■□□□□ 0.23
PDE6BP35913 HNRNPA1P55-201ENST00000505935 955 ntBASIC16.48■□□□□ 0.23
PDE6BP35913 AC253536.5-201ENST00000506097 347 ntBASIC16.48■□□□□ 0.23
PDE6BP35913 EFNA5-204ENST00000509503 637 ntTSL 5 BASIC16.48■□□□□ 0.23
PDE6BP35913 SCGB1A1-202ENST00000534397 466 ntTSL 3 BASIC16.48■□□□□ 0.23
PDE6BP35913 ZNF268-208ENST00000539248 759 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PDE6BP35913 ZNF268-212ENST00000542711 861 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PDE6BP35913 INCA1-202ENST00000574617 1260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDE6BP35913 AC012146.4-201ENST00000575546 271 ntBASIC16.48■□□□□ 0.23
PDE6BP35913 AP006248.1-201ENST00000610471 67 ntBASIC16.48■□□□□ 0.23
PDE6BP35913 BX510359.7-201ENST00000619819 630 ntBASIC16.48■□□□□ 0.23
PDE6BP35913 AC073592.10-201ENST00000624789 597 ntBASIC16.48■□□□□ 0.23
PDE6BP35913 AC005609.1-201ENST00000625195 617 ntTSL 5 BASIC16.48■□□□□ 0.23
PDE6BP35913 CHD2-218ENST00000629346 1249 ntTSL 5 BASIC16.48■□□□□ 0.23
PDE6BP35913 SMYD5-209ENST00000629411 246 ntTSL 5 BASIC16.48■□□□□ 0.23
PDE6BP35913 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC16.48■□□□□ 0.23
PDE6BP35913 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDE6BP35913 HOXA1-202ENST00000355633 2016 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms