Protein–RNA interactions for Protein: P10147

CCL3, C-C motif chemokine 3, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3P10147 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL3P10147 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL3P10147 ARHGAP21-217ENST00000612832 5514 ntTSL 5 BASIC12.32□□□□□ -0.44
CCL3P10147 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL3P10147 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CCL3P10147 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
CCL3P10147 DRD3-201ENST00000295881 1541 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
CCL3P10147 HNRNPLP1-201ENST00000421896 1501 ntBASIC12.32□□□□□ -0.44
CCL3P10147 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL3P10147 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CCL3P10147 POM121L4P-202ENST00000427789 1891 ntBASIC12.31□□□□□ -0.44
CCL3P10147 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL3P10147 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL3P10147 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL3P10147 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
CCL3P10147 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC12.31□□□□□ -0.44
CCL3P10147 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC12.31□□□□□ -0.44
CCL3P10147 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL3P10147 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC12.31□□□□□ -0.44
CCL3P10147 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL3P10147 ZNF595-203ENST00000608255 1999 ntTSL 2 BASIC12.31□□□□□ -0.44
CCL3P10147 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL3P10147 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL3P10147 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
CCL3P10147 CNGB1-202ENST00000311183 1633 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CCL3P10147 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL3P10147 MIR566-201ENST00000385187 94 ntBASIC12.31□□□□□ -0.44
CCL3P10147 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CCL3P10147 HLA-DMA-202ENST00000395303 1007 ntBASIC12.31□□□□□ -0.44
CCL3P10147 TUBB2BP1-201ENST00000404155 871 ntBASIC12.31□□□□□ -0.44
CCL3P10147 LINC00484-201ENST00000414768 561 ntTSL 5 BASIC12.31□□□□□ -0.44
CCL3P10147 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC12.31□□□□□ -0.44
CCL3P10147 AL080243.1-201ENST00000423293 1060 ntBASIC12.31□□□□□ -0.44
CCL3P10147 CD37-203ENST00000426897 1204 ntTSL 2 BASIC12.31□□□□□ -0.44
CCL3P10147 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL3P10147 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC12.31□□□□□ -0.44
CCL3P10147 NDUFB2P1-201ENST00000506966 295 ntBASIC12.31□□□□□ -0.44
CCL3P10147 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CCL3P10147 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CCL3P10147 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC12.31□□□□□ -0.44
CCL3P10147 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC12.31□□□□□ -0.44
CCL3P10147 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC12.31□□□□□ -0.44
CCL3P10147 PEBP1P2-201ENST00000603980 558 ntBASIC12.31□□□□□ -0.44
CCL3P10147 MIR6756-201ENST00000616240 63 ntBASIC12.31□□□□□ -0.44
CCL3P10147 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL3P10147 AC105206.1-202ENST00000314927 2368 ntBASIC12.31□□□□□ -0.44
CCL3P10147 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL3P10147 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC12.31□□□□□ -0.44
CCL3P10147 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL3P10147 IL19-201ENST00000270218 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL3P10147 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
CCL3P10147 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL3P10147 FARS2-201ENST00000274680 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL3P10147 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL3P10147 GK-203ENST00000378943 3707 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL3P10147 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL3P10147 PTENP1-202ENST00000532280 3996 ntBASIC12.31□□□□□ -0.44
CCL3P10147 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL3P10147 LINC00675-202ENST00000581851 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL3P10147 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
CCL3P10147 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC12.31□□□□□ -0.44
CCL3P10147 CNTNAP2-207ENST00000628930 1944 ntTSL 2 BASIC12.31□□□□□ -0.44
CCL3P10147 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL3P10147 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CCL3P10147 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC12.31□□□□□ -0.44
CCL3P10147 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL3P10147 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC12.31□□□□□ -0.44
CCL3P10147 AC079781.5-202ENST00000641784 3743 ntBASIC12.31□□□□□ -0.44
CCL3P10147 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CCL3P10147 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC12.3□□□□□ -0.44
CCL3P10147 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC12.3□□□□□ -0.44
CCL3P10147 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL3P10147 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL3P10147 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC12.3□□□□□ -0.44
CCL3P10147 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL3P10147 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
CCL3P10147 TESPA1-202ENST00000449076 2010 ntAPPRIS P3 TSL 2 BASIC12.3□□□□□ -0.44
CCL3P10147 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC12.3□□□□□ -0.44
CCL3P10147 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
CCL3P10147 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC12.3□□□□□ -0.44
CCL3P10147 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL3P10147 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC12.3□□□□□ -0.44
CCL3P10147 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC12.3□□□□□ -0.44
CCL3P10147 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC12.3□□□□□ -0.44
CCL3P10147 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CCL3P10147 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL3P10147 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC12.3□□□□□ -0.44
CCL3P10147 SLC26A8-202ENST00000394602 3144 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CCL3P10147 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL3P10147 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL3P10147 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
CCL3P10147 MRPS12-202ENST00000402029 929 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL3P10147 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC12.3□□□□□ -0.44
CCL3P10147 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC12.3□□□□□ -0.44
CCL3P10147 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL3P10147 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL3P10147 NSD1-211ENST00000511258 809 ntTSL 3 BASIC12.3□□□□□ -0.44
CCL3P10147 AC106047.2-201ENST00000511723 743 ntBASIC12.3□□□□□ -0.44
CCL3P10147 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CCL3P10147 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms