Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TPM3P06753 DLEC1-201ENST00000308059 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TPM3P06753 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TPM3P06753 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC15.3■□□□□ 0.04
TPM3P06753 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC15.3■□□□□ 0.04
TPM3P06753 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC15.3■□□□□ 0.04
TPM3P06753 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TPM3P06753 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.3■□□□□ 0.04
TPM3P06753 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TPM3P06753 AC004554.1-201ENST00000422830 1468 ntBASIC15.3■□□□□ 0.04
TPM3P06753 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.3■□□□□ 0.04
TPM3P06753 SLC48A1-201ENST00000442218 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TPM3P06753 C3orf35-206ENST00000452017 513 ntAPPRIS P5 TSL 5 BASIC15.3■□□□□ 0.04
TPM3P06753 IL2RG-204ENST00000456850 540 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TPM3P06753 TUBB8P8-201ENST00000458717 1058 ntBASIC15.3■□□□□ 0.04
TPM3P06753 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TPM3P06753 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.3■□□□□ 0.04
TPM3P06753 ADRA1A-210ENST00000519229 1838 ntTSL 5 BASIC15.3■□□□□ 0.04
TPM3P06753 KDM2A-210ENST00000529006 6967 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TPM3P06753 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC15.3■□□□□ 0.04
TPM3P06753 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TPM3P06753 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15.3■□□□□ 0.04
TPM3P06753 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.3■□□□□ 0.04
TPM3P06753 AC008805.1-201ENST00000590892 364 ntBASIC15.3■□□□□ 0.04
TPM3P06753 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TPM3P06753 MZF1-AS1-202ENST00000600534 2567 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TPM3P06753 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.3■□□□□ 0.04
TPM3P06753 DUSP22-211ENST00000604971 3824 ntTSL 2 BASIC15.3■□□□□ 0.04
TPM3P06753 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.3■□□□□ 0.04
TPM3P06753 AC091271.1-201ENST00000611877 1162 ntBASIC15.3■□□□□ 0.04
TPM3P06753 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC15.3■□□□□ 0.04
TPM3P06753 SLC20A2-201ENST00000342228 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TPM3P06753 EPB41L1-206ENST00000373950 3631 ntTSL 5 BASIC15.3■□□□□ 0.04
TPM3P06753 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TPM3P06753 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
TPM3P06753 NFAT5-209ENST00000567239 6376 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TPM3P06753 TMEM182-202ENST00000409528 3112 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TPM3P06753 CLGN-201ENST00000325617 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TPM3P06753 NEK11-209ENST00000510688 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TPM3P06753 L1CAM-202ENST00000361981 5004 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TPM3P06753 PNPLA7-202ENST00000406427 4806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TPM3P06753 LINC00523-206ENST00000556697 2071 ntTSL 2 BASIC15.29■□□□□ 0.04
TPM3P06753 PAX8-205ENST00000429538 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TPM3P06753 EPHB6-211ENST00000619012 4011 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TPM3P06753 C9orf3-201ENST00000277198 1966 ntTSL 2 BASIC15.29■□□□□ 0.04
TPM3P06753 TNFRSF8-203ENST00000417814 3593 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TPM3P06753 CD27-AS1-209ENST00000545339 1766 ntTSL 5 BASIC15.29■□□□□ 0.04
TPM3P06753 NQO2-205ENST00000380455 10084 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TPM3P06753 CLCN4-203ENST00000421085 6534 ntTSL 5 BASIC15.29■□□□□ 0.04
TPM3P06753 GRM2-202ENST00000395052 3151 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TPM3P06753 PCSK2-202ENST00000377899 4674 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TPM3P06753 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TPM3P06753 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TPM3P06753 MGAT4EP-201ENST00000330493 2810 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TPM3P06753 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TPM3P06753 PSMD2-205ENST00000435761 2574 ntTSL 2 BASIC15.29■□□□□ 0.04
TPM3P06753 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC15.29■□□□□ 0.04
TPM3P06753 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC15.29■□□□□ 0.04
TPM3P06753 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.29■□□□□ 0.04
TPM3P06753 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TPM3P06753 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
TPM3P06753 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TPM3P06753 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC15.29■□□□□ 0.04
TPM3P06753 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.29■□□□□ 0.04
TPM3P06753 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TPM3P06753 AC006538.3-201ENST00000612495 578 ntBASIC15.29■□□□□ 0.04
TPM3P06753 ZNF568-201ENST00000333987 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TPM3P06753 ZNF502-203ENST00000436624 2314 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TPM3P06753 CHRNA7-223ENST00000637033 3204 ntTSL 5 BASIC15.29■□□□□ 0.04
TPM3P06753 HK3-201ENST00000292432 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TPM3P06753 UGGT2-203ENST00000376747 4832 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TPM3P06753 AC245140.2-201ENST00000624054 1939 ntBASIC15.29■□□□□ 0.04
TPM3P06753 AC096564.1-201ENST00000499098 2810 ntTSL 2 BASIC15.29■□□□□ 0.04
TPM3P06753 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TPM3P06753 UBTF-209ENST00000529383 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TPM3P06753 LRRC57-201ENST00000323443 7351 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TPM3P06753 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC15.28■□□□□ 0.04
TPM3P06753 IL21R-201ENST00000337929 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TPM3P06753 FAHD2A-201ENST00000233379 4757 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TPM3P06753 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC15.28■□□□□ 0.04
TPM3P06753 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC15.28■□□□□ 0.04
TPM3P06753 EHMT2-202ENST00000375530 3856 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TPM3P06753 EFHD1-204ENST00000410095 1538 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TPM3P06753 ZNF555-203ENST00000591539 2270 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
TPM3P06753 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TPM3P06753 WIPF3-201ENST00000242140 4184 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
TPM3P06753 MAK16-201ENST00000360128 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TPM3P06753 LMO1-201ENST00000335790 1279 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TPM3P06753 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
TPM3P06753 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TPM3P06753 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.28■□□□□ 0.04
TPM3P06753 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC15.28■□□□□ 0.04
TPM3P06753 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.28■□□□□ 0.04
TPM3P06753 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.28■□□□□ 0.04
TPM3P06753 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
TPM3P06753 LMO1-204ENST00000534484 770 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
TPM3P06753 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC15.28■□□□□ 0.04
TPM3P06753 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TPM3P06753 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.28■□□□□ 0.04
TPM3P06753 TMEM164-204ENST00000372073 5567 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms