Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
CD74P04233 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CD74P04233 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC11.44□□□□□ -0.58
CD74P04233 CFL1P6-201ENST00000400899 494 ntBASIC11.44□□□□□ -0.58
CD74P04233 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC11.44□□□□□ -0.58
CD74P04233 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC11.44□□□□□ -0.58
CD74P04233 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC11.44□□□□□ -0.58
CD74P04233 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC11.44□□□□□ -0.58
CD74P04233 COX20P2-201ENST00000452636 358 ntBASIC11.44□□□□□ -0.58
CD74P04233 TUBB8P8-201ENST00000458717 1058 ntBASIC11.44□□□□□ -0.58
CD74P04233 RN7SL837P-201ENST00000463010 287 ntBASIC11.44□□□□□ -0.58
CD74P04233 HLA-J-204ENST00000495278 958 ntBASIC11.44□□□□□ -0.58
CD74P04233 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC11.44□□□□□ -0.58
CD74P04233 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CD74P04233 CD164-210ENST00000512821 964 ntTSL 2 BASIC11.44□□□□□ -0.58
CD74P04233 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CD74P04233 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC11.44□□□□□ -0.58
CD74P04233 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
CD74P04233 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC11.44□□□□□ -0.58
CD74P04233 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC11.44□□□□□ -0.58
CD74P04233 AC005324.6-201ENST00000587972 613 ntBASIC11.44□□□□□ -0.58
CD74P04233 BTNL10-201ENST00000595971 695 ntBASIC11.44□□□□□ -0.58
CD74P04233 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC11.44□□□□□ -0.58
CD74P04233 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC11.44□□□□□ -0.58
CD74P04233 PLA2G15-201ENST00000219345 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CD74P04233 PFKM-201ENST00000312352 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CD74P04233 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CD74P04233 ENO2-209ENST00000538763 1646 ntTSL 5 BASIC11.44□□□□□ -0.58
CD74P04233 HNRNPL-210ENST00000600873 1633 ntTSL 5 BASIC11.44□□□□□ -0.58
CD74P04233 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CD74P04233 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
CD74P04233 ESYT3-202ENST00000389567 4407 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CD74P04233 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CD74P04233 TOLLIP-207ENST00000527886 3666 ntTSL 2 BASIC11.44□□□□□ -0.58
CD74P04233 SLC5A11-205ENST00000545376 2294 ntTSL 2 BASIC11.44□□□□□ -0.58
CD74P04233 TGOLN2-206ENST00000444342 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
CD74P04233 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CD74P04233 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC11.44□□□□□ -0.58
CD74P04233 HSPB7-201ENST00000311890 2892 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
CD74P04233 GPR12-202ENST00000405846 4850 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CD74P04233 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC11.44□□□□□ -0.58
CD74P04233 AP001046.1-201ENST00000435702 2816 ntTSL 2 BASIC11.44□□□□□ -0.58
CD74P04233 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CD74P04233 C10orf76-202ENST00000370033 4119 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
CD74P04233 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
CD74P04233 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
CD74P04233 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CD74P04233 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CD74P04233 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CD74P04233 PES1P2-201ENST00000449745 1735 ntBASIC11.43□□□□□ -0.58
CD74P04233 THSD1-201ENST00000258613 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CD74P04233 LINC01624-203ENST00000607074 3265 ntTSL 2 BASIC11.43□□□□□ -0.58
CD74P04233 FAM230B-208ENST00000451257 3566 ntTSL 5 BASIC11.43□□□□□ -0.58
CD74P04233 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
CD74P04233 ABCC4-207ENST00000629385 2903 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CD74P04233 GAS7-219ENST00000585266 3535 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CD74P04233 PHKB-208ENST00000566044 3829 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CD74P04233 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC11.43□□□□□ -0.58
CD74P04233 HIF3A-204ENST00000300862 2551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
CD74P04233 LPP-AS2-201ENST00000605573 2852 ntBASIC11.43□□□□□ -0.58
CD74P04233 AEBP1-201ENST00000223357 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CD74P04233 IL1RAP-211ENST00000439062 2244 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
CD74P04233 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CD74P04233 ACSF3-201ENST00000317447 3664 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
CD74P04233 SEPT10-202ENST00000397712 3071 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CD74P04233 EPB41L1-206ENST00000373950 3631 ntTSL 5 BASIC11.43□□□□□ -0.58
CD74P04233 PKP4P1-201ENST00000426801 2158 ntBASIC11.43□□□□□ -0.58
CD74P04233 HOTTIP-203ENST00000521028 3345 ntTSL 5 BASIC11.43□□□□□ -0.58
CD74P04233 PECR-201ENST00000265322 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CD74P04233 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
CD74P04233 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC11.43□□□□□ -0.58
CD74P04233 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC11.43□□□□□ -0.58
CD74P04233 ZMAT5-201ENST00000344318 899 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CD74P04233 ZNF44-202ENST00000355684 2119 ntAPPRIS P3 TSL 2 BASIC11.43□□□□□ -0.58
CD74P04233 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CD74P04233 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
CD74P04233 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC11.43□□□□□ -0.58
CD74P04233 GOLGA6L11P-201ENST00000417252 1298 ntBASIC11.43□□□□□ -0.58
CD74P04233 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC11.43□□□□□ -0.58
CD74P04233 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC11.43□□□□□ -0.58
CD74P04233 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CD74P04233 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CD74P04233 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC11.43□□□□□ -0.58
CD74P04233 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CD74P04233 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC11.43□□□□□ -0.58
CD74P04233 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC11.43□□□□□ -0.58
CD74P04233 MIR4326-201ENST00000582203 59 ntBASIC11.43□□□□□ -0.58
CD74P04233 AC008735.3-201ENST00000596646 500 ntBASIC11.43□□□□□ -0.58
CD74P04233 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CD74P04233 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC11.43□□□□□ -0.58
CD74P04233 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
CD74P04233 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC11.43□□□□□ -0.58
CD74P04233 ARAP1-209ENST00000455638 2683 ntTSL 5 BASIC11.43□□□□□ -0.58
CD74P04233 TRAF5-203ENST00000367004 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CD74P04233 POM121L1P-202ENST00000605258 1835 ntBASIC11.43□□□□□ -0.58
CD74P04233 ZNF287-202ENST00000395825 3208 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CD74P04233 CRHR1-206ENST00000398285 2399 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CD74P04233 EPB42-202ENST00000441366 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CD74P04233 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC11.43□□□□□ -0.58
CD74P04233 JAML-211ENST00000533261 1508 ntTSL 5 BASIC11.43□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms