Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 AC242852.2-201ENST00000615738 1807 ntBASIC21.41■■□□□ 1.02
PCDHA9Q9Y5H5 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHA9Q9Y5H5 ESRRAP2-201ENST00000418437 1549 ntBASIC21.4■■□□□ 1.02
PCDHA9Q9Y5H5 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
PCDHA9Q9Y5H5 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHA9Q9Y5H5 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHA9Q9Y5H5 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHA9Q9Y5H5 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.4■■□□□ 1.02
PCDHA9Q9Y5H5 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHA9Q9Y5H5 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.4■■□□□ 1.02
PCDHA9Q9Y5H5 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.4■■□□□ 1.02
PCDHA9Q9Y5H5 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PCDHA9Q9Y5H5 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PCDHA9Q9Y5H5 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
PCDHA9Q9Y5H5 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.39■■□□□ 1.01
PCDHA9Q9Y5H5 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
PCDHA9Q9Y5H5 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.39■■□□□ 1.01
PCDHA9Q9Y5H5 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHA9Q9Y5H5 AL035685.1-201ENST00000636663 812 ntBASIC21.39■■□□□ 1.01
PCDHA9Q9Y5H5 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.39■■□□□ 1.01
PCDHA9Q9Y5H5 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHA9Q9Y5H5 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHA9Q9Y5H5 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
PCDHA9Q9Y5H5 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
PCDHA9Q9Y5H5 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHA9Q9Y5H5 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.38■■□□□ 1.01
PCDHA9Q9Y5H5 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
PCDHA9Q9Y5H5 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHA9Q9Y5H5 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.38■■□□□ 1.01
PCDHA9Q9Y5H5 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.38■■□□□ 1.01
PCDHA9Q9Y5H5 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.38■■□□□ 1.01
PCDHA9Q9Y5H5 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHA9Q9Y5H5 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHA9Q9Y5H5 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHA9Q9Y5H5 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHA9Q9Y5H5 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHA9Q9Y5H5 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.37■■□□□ 1.01
PCDHA9Q9Y5H5 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.37■■□□□ 1.01
PCDHA9Q9Y5H5 MTDHP2-201ENST00000601468 714 ntBASIC21.37■■□□□ 1.01
PCDHA9Q9Y5H5 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHA9Q9Y5H5 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHA9Q9Y5H5 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHA9Q9Y5H5 AC005703.6-201ENST00000623265 1329 ntBASIC21.36■■□□□ 1.01
PCDHA9Q9Y5H5 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHA9Q9Y5H5 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
PCDHA9Q9Y5H5 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHA9Q9Y5H5 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHA9Q9Y5H5 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
PCDHA9Q9Y5H5 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHA9Q9Y5H5 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHA9Q9Y5H5 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.35■■□□□ 1.01
PCDHA9Q9Y5H5 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.35■■□□□ 1.01
PCDHA9Q9Y5H5 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHA9Q9Y5H5 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.35■■□□□ 1.01
PCDHA9Q9Y5H5 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHA9Q9Y5H5 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.35■■□□□ 1.01
PCDHA9Q9Y5H5 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHA9Q9Y5H5 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.34■■□□□ 1.01
PCDHA9Q9Y5H5 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHA9Q9Y5H5 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
PCDHA9Q9Y5H5 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
PCDHA9Q9Y5H5 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHA9Q9Y5H5 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHA9Q9Y5H5 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHA9Q9Y5H5 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHA9Q9Y5H5 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.34■■□□□ 1.01
PCDHA9Q9Y5H5 TSPY9P-201ENST00000440215 945 ntBASIC21.34■■□□□ 1.01
PCDHA9Q9Y5H5 TSPY11P-201ENST00000442607 1045 ntBASIC21.34■■□□□ 1.01
PCDHA9Q9Y5H5 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.34■■□□□ 1.01
PCDHA9Q9Y5H5 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.34■■□□□ 1.01
PCDHA9Q9Y5H5 AC010997.5-201ENST00000609182 354 ntBASIC21.34■■□□□ 1.01
PCDHA9Q9Y5H5 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
PCDHA9Q9Y5H5 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHA9Q9Y5H5 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHA9Q9Y5H5 AC007375.3-201ENST00000600936 2314 ntBASIC21.33■■□□□ 1.01
PCDHA9Q9Y5H5 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHA9Q9Y5H5 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHA9Q9Y5H5 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHA9Q9Y5H5 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHA9Q9Y5H5 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1.01
PCDHA9Q9Y5H5 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHA9Q9Y5H5 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHA9Q9Y5H5 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
PCDHA9Q9Y5H5 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PCDHA9Q9Y5H5 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PCDHA9Q9Y5H5 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
PCDHA9Q9Y5H5 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PCDHA9Q9Y5H5 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PCDHA9Q9Y5H5 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.33■■□□□ 1
PCDHA9Q9Y5H5 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.32■■□□□ 1
PCDHA9Q9Y5H5 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.32■■□□□ 1
PCDHA9Q9Y5H5 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHA9Q9Y5H5 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.32■■□□□ 1
PCDHA9Q9Y5H5 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.32■■□□□ 1
PCDHA9Q9Y5H5 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.32■■□□□ 1
PCDHA9Q9Y5H5 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHA9Q9Y5H5 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHA9Q9Y5H5 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.32■■□□□ 1
PCDHA9Q9Y5H5 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.32■■□□□ 1
PCDHA9Q9Y5H5 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms