Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHB11Q9Y5F2 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHB11Q9Y5F2 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
PCDHB11Q9Y5F2 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHB11Q9Y5F2 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.76■■□□□ 1.07
PCDHB11Q9Y5F2 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDHB11Q9Y5F2 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHB11Q9Y5F2 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.75■■□□□ 1.07
PCDHB11Q9Y5F2 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDHB11Q9Y5F2 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHB11Q9Y5F2 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHB11Q9Y5F2 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHB11Q9Y5F2 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.74■■□□□ 1.07
PCDHB11Q9Y5F2 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHB11Q9Y5F2 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
PCDHB11Q9Y5F2 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHB11Q9Y5F2 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.74■■□□□ 1.07
PCDHB11Q9Y5F2 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
PCDHB11Q9Y5F2 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
PCDHB11Q9Y5F2 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHB11Q9Y5F2 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHB11Q9Y5F2 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHB11Q9Y5F2 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.73■■□□□ 1.07
PCDHB11Q9Y5F2 MIR4767-201ENST00000582827 78 ntBASIC21.73■■□□□ 1.07
PCDHB11Q9Y5F2 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.73■■□□□ 1.07
PCDHB11Q9Y5F2 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.73■■□□□ 1.07
PCDHB11Q9Y5F2 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHB11Q9Y5F2 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
PCDHB11Q9Y5F2 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHB11Q9Y5F2 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
PCDHB11Q9Y5F2 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHB11Q9Y5F2 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHB11Q9Y5F2 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
PCDHB11Q9Y5F2 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHB11Q9Y5F2 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHB11Q9Y5F2 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.72■■□□□ 1.07
PCDHB11Q9Y5F2 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.72■■□□□ 1.07
PCDHB11Q9Y5F2 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.72■■□□□ 1.07
PCDHB11Q9Y5F2 MIR6821-201ENST00000617625 74 ntBASIC21.72■■□□□ 1.07
PCDHB11Q9Y5F2 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHB11Q9Y5F2 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHB11Q9Y5F2 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHB11Q9Y5F2 RASA4CP-201ENST00000424092 1398 ntBASIC21.72■■□□□ 1.07
PCDHB11Q9Y5F2 C17orf82-201ENST00000623772 1530 ntBASIC21.71■■□□□ 1.07
PCDHB11Q9Y5F2 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
PCDHB11Q9Y5F2 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.71■■□□□ 1.07
PCDHB11Q9Y5F2 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.71■■□□□ 1.07
PCDHB11Q9Y5F2 AC099791.2-201ENST00000605725 427 ntBASIC21.71■■□□□ 1.07
PCDHB11Q9Y5F2 AL138724.1-201ENST00000606771 1088 ntBASIC21.71■■□□□ 1.07
PCDHB11Q9Y5F2 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHB11Q9Y5F2 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.71■■□□□ 1.07
PCDHB11Q9Y5F2 AC241377.3-202ENST00000626088 1088 ntBASIC21.71■■□□□ 1.07
PCDHB11Q9Y5F2 AC241585.3-202ENST00000628937 1088 ntBASIC21.71■■□□□ 1.07
PCDHB11Q9Y5F2 AC245100.8-202ENST00000629247 1058 ntBASIC21.71■■□□□ 1.07
PCDHB11Q9Y5F2 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHB11Q9Y5F2 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHB11Q9Y5F2 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
PCDHB11Q9Y5F2 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHB11Q9Y5F2 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHB11Q9Y5F2 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHB11Q9Y5F2 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHB11Q9Y5F2 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.7■■□□□ 1.06
PCDHB11Q9Y5F2 AC027682.1-201ENST00000562846 899 ntBASIC21.7■■□□□ 1.06
PCDHB11Q9Y5F2 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
PCDHB11Q9Y5F2 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHB11Q9Y5F2 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHB11Q9Y5F2 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.7■■□□□ 1.06
PCDHB11Q9Y5F2 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
PCDHB11Q9Y5F2 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHB11Q9Y5F2 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB11Q9Y5F2 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
PCDHB11Q9Y5F2 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB11Q9Y5F2 AC097381.1-201ENST00000429019 1296 ntBASIC21.69■■□□□ 1.06
PCDHB11Q9Y5F2 CA15P2-201ENST00000611168 834 ntBASIC21.69■■□□□ 1.06
PCDHB11Q9Y5F2 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.69■■□□□ 1.06
PCDHB11Q9Y5F2 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB11Q9Y5F2 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
PCDHB11Q9Y5F2 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB11Q9Y5F2 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.69■■□□□ 1.06
PCDHB11Q9Y5F2 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB11Q9Y5F2 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB11Q9Y5F2 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB11Q9Y5F2 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB11Q9Y5F2 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB11Q9Y5F2 SERBP1P1-201ENST00000396021 1160 ntBASIC21.68■■□□□ 1.06
PCDHB11Q9Y5F2 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.68■■□□□ 1.06
PCDHB11Q9Y5F2 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
PCDHB11Q9Y5F2 AC011298.3-201ENST00000615796 283 ntBASIC21.68■■□□□ 1.06
PCDHB11Q9Y5F2 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB11Q9Y5F2 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.68■■□□□ 1.06
PCDHB11Q9Y5F2 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB11Q9Y5F2 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.68■■□□□ 1.06
PCDHB11Q9Y5F2 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB11Q9Y5F2 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB11Q9Y5F2 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.67■■□□□ 1.06
PCDHB11Q9Y5F2 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHB11Q9Y5F2 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHB11Q9Y5F2 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHB11Q9Y5F2 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHB11Q9Y5F2 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms