Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MRPS28Q9Y2Q9 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MRPS28Q9Y2Q9 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MRPS28Q9Y2Q9 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MRPS28Q9Y2Q9 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.1■□□□□ 0.65
MRPS28Q9Y2Q9 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MRPS28Q9Y2Q9 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MRPS28Q9Y2Q9 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.1■□□□□ 0.65
MRPS28Q9Y2Q9 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.1■□□□□ 0.65
MRPS28Q9Y2Q9 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.1■□□□□ 0.65
MRPS28Q9Y2Q9 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
MRPS28Q9Y2Q9 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MRPS28Q9Y2Q9 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MRPS28Q9Y2Q9 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MRPS28Q9Y2Q9 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
MRPS28Q9Y2Q9 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MRPS28Q9Y2Q9 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
MRPS28Q9Y2Q9 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
MRPS28Q9Y2Q9 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.09■□□□□ 0.65
MRPS28Q9Y2Q9 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
MRPS28Q9Y2Q9 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
MRPS28Q9Y2Q9 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
MRPS28Q9Y2Q9 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.09■□□□□ 0.65
MRPS28Q9Y2Q9 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
MRPS28Q9Y2Q9 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MRPS28Q9Y2Q9 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MRPS28Q9Y2Q9 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.08■□□□□ 0.65
MRPS28Q9Y2Q9 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
MRPS28Q9Y2Q9 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
MRPS28Q9Y2Q9 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.08■□□□□ 0.65
MRPS28Q9Y2Q9 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.08■□□□□ 0.65
MRPS28Q9Y2Q9 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
MRPS28Q9Y2Q9 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.08■□□□□ 0.64
MRPS28Q9Y2Q9 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MRPS28Q9Y2Q9 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.08■□□□□ 0.64
MRPS28Q9Y2Q9 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MRPS28Q9Y2Q9 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MRPS28Q9Y2Q9 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MRPS28Q9Y2Q9 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
MRPS28Q9Y2Q9 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
MRPS28Q9Y2Q9 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
MRPS28Q9Y2Q9 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MRPS28Q9Y2Q9 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.08■□□□□ 0.64
MRPS28Q9Y2Q9 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
MRPS28Q9Y2Q9 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.07■□□□□ 0.64
MRPS28Q9Y2Q9 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.07■□□□□ 0.64
MRPS28Q9Y2Q9 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
MRPS28Q9Y2Q9 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
MRPS28Q9Y2Q9 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.07■□□□□ 0.64
MRPS28Q9Y2Q9 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MRPS28Q9Y2Q9 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MRPS28Q9Y2Q9 TSPY13P-201ENST00000338964 914 ntBASIC19.07■□□□□ 0.64
MRPS28Q9Y2Q9 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
MRPS28Q9Y2Q9 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.07■□□□□ 0.64
MRPS28Q9Y2Q9 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MRPS28Q9Y2Q9 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
MRPS28Q9Y2Q9 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
MRPS28Q9Y2Q9 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
MRPS28Q9Y2Q9 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.06■□□□□ 0.64
MRPS28Q9Y2Q9 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.06■□□□□ 0.64
MRPS28Q9Y2Q9 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
MRPS28Q9Y2Q9 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.06■□□□□ 0.64
MRPS28Q9Y2Q9 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
MRPS28Q9Y2Q9 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.06■□□□□ 0.64
MRPS28Q9Y2Q9 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.06■□□□□ 0.64
MRPS28Q9Y2Q9 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
MRPS28Q9Y2Q9 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
MRPS28Q9Y2Q9 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
MRPS28Q9Y2Q9 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
MRPS28Q9Y2Q9 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
MRPS28Q9Y2Q9 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
MRPS28Q9Y2Q9 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.06■□□□□ 0.64
MRPS28Q9Y2Q9 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
MRPS28Q9Y2Q9 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.05■□□□□ 0.64
MRPS28Q9Y2Q9 AC144652.1-201ENST00000609974 1624 ntBASIC19.05■□□□□ 0.64
MRPS28Q9Y2Q9 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
MRPS28Q9Y2Q9 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.05■□□□□ 0.64
MRPS28Q9Y2Q9 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.05■□□□□ 0.64
MRPS28Q9Y2Q9 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
MRPS28Q9Y2Q9 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC19.05■□□□□ 0.64
MRPS28Q9Y2Q9 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.05■□□□□ 0.64
MRPS28Q9Y2Q9 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.05■□□□□ 0.64
MRPS28Q9Y2Q9 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MRPS28Q9Y2Q9 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MRPS28Q9Y2Q9 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.05■□□□□ 0.64
MRPS28Q9Y2Q9 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
MRPS28Q9Y2Q9 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MRPS28Q9Y2Q9 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.04■□□□□ 0.64
MRPS28Q9Y2Q9 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
MRPS28Q9Y2Q9 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
MRPS28Q9Y2Q9 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
MRPS28Q9Y2Q9 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
MRPS28Q9Y2Q9 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MRPS28Q9Y2Q9 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.04■□□□□ 0.64
MRPS28Q9Y2Q9 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.04■□□□□ 0.64
MRPS28Q9Y2Q9 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
MRPS28Q9Y2Q9 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
MRPS28Q9Y2Q9 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
MRPS28Q9Y2Q9 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MRPS28Q9Y2Q9 AC092053.2-201ENST00000640557 1818 ntBASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms