Protein–RNA interactions for Protein: Q9Y279

VSIG4, V-set and immunoglobulin domain-containing protein 4, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG4Q9Y279 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
VSIG4Q9Y279 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
VSIG4Q9Y279 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VSIG4Q9Y279 AC079630.1-202ENST00000618127 1840 ntBASIC18.74■□□□□ 0.59
VSIG4Q9Y279 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VSIG4Q9Y279 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VSIG4Q9Y279 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VSIG4Q9Y279 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
VSIG4Q9Y279 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VSIG4Q9Y279 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.73■□□□□ 0.59
VSIG4Q9Y279 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
VSIG4Q9Y279 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VSIG4Q9Y279 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
VSIG4Q9Y279 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VSIG4Q9Y279 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VSIG4Q9Y279 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
VSIG4Q9Y279 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VSIG4Q9Y279 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
VSIG4Q9Y279 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
VSIG4Q9Y279 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
VSIG4Q9Y279 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
VSIG4Q9Y279 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
VSIG4Q9Y279 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
VSIG4Q9Y279 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
VSIG4Q9Y279 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VSIG4Q9Y279 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
VSIG4Q9Y279 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VSIG4Q9Y279 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
VSIG4Q9Y279 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VSIG4Q9Y279 AC080038.3-201ENST00000623346 1952 ntBASIC18.72■□□□□ 0.59
VSIG4Q9Y279 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
VSIG4Q9Y279 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
VSIG4Q9Y279 AC139795.1-202ENST00000500444 432 ntBASIC18.72■□□□□ 0.59
VSIG4Q9Y279 BHLHE23-202ENST00000612929 1109 ntBASIC18.72■□□□□ 0.59
VSIG4Q9Y279 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC18.72■□□□□ 0.59
VSIG4Q9Y279 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC18.72■□□□□ 0.59
VSIG4Q9Y279 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.72■□□□□ 0.59
VSIG4Q9Y279 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC18.72■□□□□ 0.59
VSIG4Q9Y279 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.72■□□□□ 0.59
VSIG4Q9Y279 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VSIG4Q9Y279 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
VSIG4Q9Y279 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
VSIG4Q9Y279 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
VSIG4Q9Y279 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VSIG4Q9Y279 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
VSIG4Q9Y279 IDNK-203ENST00000405990 629 ntTSL 2 BASIC18.71■□□□□ 0.59
VSIG4Q9Y279 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
VSIG4Q9Y279 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.71■□□□□ 0.59
VSIG4Q9Y279 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
VSIG4Q9Y279 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.71■□□□□ 0.59
VSIG4Q9Y279 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
VSIG4Q9Y279 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VSIG4Q9Y279 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
VSIG4Q9Y279 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VSIG4Q9Y279 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VSIG4Q9Y279 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
VSIG4Q9Y279 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
VSIG4Q9Y279 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
VSIG4Q9Y279 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
VSIG4Q9Y279 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC18.7■□□□□ 0.58
VSIG4Q9Y279 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
VSIG4Q9Y279 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.7■□□□□ 0.58
VSIG4Q9Y279 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
VSIG4Q9Y279 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
VSIG4Q9Y279 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
VSIG4Q9Y279 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VSIG4Q9Y279 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
VSIG4Q9Y279 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VSIG4Q9Y279 AC026310.3-201ENST00000625186 2373 ntBASIC18.69■□□□□ 0.58
VSIG4Q9Y279 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
VSIG4Q9Y279 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
VSIG4Q9Y279 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
VSIG4Q9Y279 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC18.69■□□□□ 0.58
VSIG4Q9Y279 SSSCA1-AS1-201ENST00000567594 614 ntBASIC18.69■□□□□ 0.58
VSIG4Q9Y279 AC074183.2-201ENST00000623112 922 ntBASIC18.69■□□□□ 0.58
VSIG4Q9Y279 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VSIG4Q9Y279 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
VSIG4Q9Y279 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
VSIG4Q9Y279 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.69■□□□□ 0.58
VSIG4Q9Y279 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
VSIG4Q9Y279 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
VSIG4Q9Y279 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VSIG4Q9Y279 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.68■□□□□ 0.58
VSIG4Q9Y279 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
VSIG4Q9Y279 PKD1P6-201ENST00000343738 4769 ntBASIC18.68■□□□□ 0.58
VSIG4Q9Y279 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.68■□□□□ 0.58
VSIG4Q9Y279 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC18.68■□□□□ 0.58
VSIG4Q9Y279 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VSIG4Q9Y279 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC18.68■□□□□ 0.58
VSIG4Q9Y279 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC18.68■□□□□ 0.58
VSIG4Q9Y279 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC18.68■□□□□ 0.58
VSIG4Q9Y279 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VSIG4Q9Y279 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VSIG4Q9Y279 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VSIG4Q9Y279 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
VSIG4Q9Y279 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VSIG4Q9Y279 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.68■□□□□ 0.58
VSIG4Q9Y279 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.67■□□□□ 0.58
VSIG4Q9Y279 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
VSIG4Q9Y279 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms