Protein–RNA interactions for Protein: Q9UPU9

SAMD4A, Protein Smaug homolog 1, humanhuman

Known RBP Predictions only

Length 718 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4AQ9UPU9 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SAMD4AQ9UPU9 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.78■□□□□ 0.92
SAMD4AQ9UPU9 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SAMD4AQ9UPU9 AC139795.1-202ENST00000500444 432 ntBASIC20.78■□□□□ 0.92
SAMD4AQ9UPU9 AC120024.1-201ENST00000562672 995 ntBASIC20.78■□□□□ 0.92
SAMD4AQ9UPU9 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SAMD4AQ9UPU9 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SAMD4AQ9UPU9 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SAMD4AQ9UPU9 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
SAMD4AQ9UPU9 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
SAMD4AQ9UPU9 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SAMD4AQ9UPU9 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.77■□□□□ 0.92
SAMD4AQ9UPU9 AF131216.4-201ENST00000638924 1588 ntBASIC20.77■□□□□ 0.92
SAMD4AQ9UPU9 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
SAMD4AQ9UPU9 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SAMD4AQ9UPU9 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.77■□□□□ 0.92
SAMD4AQ9UPU9 RARRES2P2-201ENST00000394842 485 ntBASIC20.77■□□□□ 0.92
SAMD4AQ9UPU9 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.77■□□□□ 0.92
SAMD4AQ9UPU9 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.77■□□□□ 0.92
SAMD4AQ9UPU9 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SAMD4AQ9UPU9 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
SAMD4AQ9UPU9 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SAMD4AQ9UPU9 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SAMD4AQ9UPU9 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SAMD4AQ9UPU9 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SAMD4AQ9UPU9 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SAMD4AQ9UPU9 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.76■□□□□ 0.91
SAMD4AQ9UPU9 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SAMD4AQ9UPU9 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SAMD4AQ9UPU9 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
SAMD4AQ9UPU9 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SAMD4AQ9UPU9 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.76■□□□□ 0.91
SAMD4AQ9UPU9 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SAMD4AQ9UPU9 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SAMD4AQ9UPU9 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.75■□□□□ 0.91
SAMD4AQ9UPU9 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
SAMD4AQ9UPU9 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
SAMD4AQ9UPU9 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SAMD4AQ9UPU9 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SAMD4AQ9UPU9 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.75■□□□□ 0.91
SAMD4AQ9UPU9 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SAMD4AQ9UPU9 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SAMD4AQ9UPU9 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SAMD4AQ9UPU9 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SAMD4AQ9UPU9 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SAMD4AQ9UPU9 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SAMD4AQ9UPU9 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SAMD4AQ9UPU9 KRT18P60-201ENST00000312876 1297 ntBASIC20.74■□□□□ 0.91
SAMD4AQ9UPU9 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
SAMD4AQ9UPU9 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SAMD4AQ9UPU9 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
SAMD4AQ9UPU9 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
SAMD4AQ9UPU9 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.74■□□□□ 0.91
SAMD4AQ9UPU9 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SAMD4AQ9UPU9 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SAMD4AQ9UPU9 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SAMD4AQ9UPU9 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SAMD4AQ9UPU9 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SAMD4AQ9UPU9 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
SAMD4AQ9UPU9 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
SAMD4AQ9UPU9 AC080038.3-201ENST00000623346 1952 ntBASIC20.73■□□□□ 0.91
SAMD4AQ9UPU9 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SAMD4AQ9UPU9 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SAMD4AQ9UPU9 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SAMD4AQ9UPU9 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SAMD4AQ9UPU9 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SAMD4AQ9UPU9 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SAMD4AQ9UPU9 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.72■□□□□ 0.91
SAMD4AQ9UPU9 MIR4281-201ENST00000580852 62 ntBASIC20.72■□□□□ 0.91
SAMD4AQ9UPU9 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SAMD4AQ9UPU9 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.72■□□□□ 0.91
SAMD4AQ9UPU9 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.72■□□□□ 0.91
SAMD4AQ9UPU9 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
SAMD4AQ9UPU9 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SAMD4AQ9UPU9 KRT18P24-201ENST00000344739 1156 ntBASIC20.71■□□□□ 0.91
SAMD4AQ9UPU9 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.71■□□□□ 0.91
SAMD4AQ9UPU9 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SAMD4AQ9UPU9 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.71■□□□□ 0.91
SAMD4AQ9UPU9 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.71■□□□□ 0.91
SAMD4AQ9UPU9 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.71■□□□□ 0.91
SAMD4AQ9UPU9 THA1P-201ENST00000590384 1145 ntBASIC20.71■□□□□ 0.91
SAMD4AQ9UPU9 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SAMD4AQ9UPU9 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SAMD4AQ9UPU9 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
SAMD4AQ9UPU9 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SAMD4AQ9UPU9 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
SAMD4AQ9UPU9 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.91
SAMD4AQ9UPU9 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SAMD4AQ9UPU9 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SAMD4AQ9UPU9 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SAMD4AQ9UPU9 AC087742.1-201ENST00000575880 1738 ntBASIC20.7■□□□□ 0.9
SAMD4AQ9UPU9 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.7■□□□□ 0.9
SAMD4AQ9UPU9 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.7■□□□□ 0.9
SAMD4AQ9UPU9 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.7■□□□□ 0.9
SAMD4AQ9UPU9 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SAMD4AQ9UPU9 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.7■□□□□ 0.9
SAMD4AQ9UPU9 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SAMD4AQ9UPU9 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SAMD4AQ9UPU9 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.7■□□□□ 0.9
SAMD4AQ9UPU9 AC144652.1-201ENST00000609974 1624 ntBASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms