Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
ZC3H4Q9UPT8 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC27.23■■□□□ 1.95
ZC3H4Q9UPT8 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC27.23■■□□□ 1.95
ZC3H4Q9UPT8 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC27.23■■□□□ 1.95
ZC3H4Q9UPT8 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC27.23■■□□□ 1.95
ZC3H4Q9UPT8 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC27.23■■□□□ 1.95
ZC3H4Q9UPT8 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
ZC3H4Q9UPT8 TSPY6P-201ENST00000448518 926 ntBASIC27.23■■□□□ 1.95
ZC3H4Q9UPT8 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC27.23■■□□□ 1.95
ZC3H4Q9UPT8 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC27.23■■□□□ 1.95
ZC3H4Q9UPT8 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC27.23■■□□□ 1.95
ZC3H4Q9UPT8 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
ZC3H4Q9UPT8 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
ZC3H4Q9UPT8 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
ZC3H4Q9UPT8 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC27.22■■□□□ 1.95
ZC3H4Q9UPT8 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
ZC3H4Q9UPT8 DET1-205ENST00000558413 583 ntTSL 4 BASIC27.22■■□□□ 1.95
ZC3H4Q9UPT8 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
ZC3H4Q9UPT8 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC27.21■■□□□ 1.95
ZC3H4Q9UPT8 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC27.21■■□□□ 1.95
ZC3H4Q9UPT8 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC27.21■■□□□ 1.95
ZC3H4Q9UPT8 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
ZC3H4Q9UPT8 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC27.21■■□□□ 1.95
ZC3H4Q9UPT8 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
ZC3H4Q9UPT8 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC27.2■■□□□ 1.95
ZC3H4Q9UPT8 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.95
ZC3H4Q9UPT8 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC27.2■■□□□ 1.95
ZC3H4Q9UPT8 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.95
ZC3H4Q9UPT8 FAM201B-201ENST00000458407 597 ntBASIC27.2■■□□□ 1.95
ZC3H4Q9UPT8 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC27.2■■□□□ 1.95
ZC3H4Q9UPT8 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC27.2■■□□□ 1.95
ZC3H4Q9UPT8 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC27.2■■□□□ 1.95
ZC3H4Q9UPT8 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
ZC3H4Q9UPT8 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
ZC3H4Q9UPT8 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC27.19■■□□□ 1.94
ZC3H4Q9UPT8 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC27.19■■□□□ 1.94
ZC3H4Q9UPT8 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC27.19■■□□□ 1.94
ZC3H4Q9UPT8 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
ZC3H4Q9UPT8 GUSBP6-202ENST00000438529 1198 ntBASIC27.18■■□□□ 1.94
ZC3H4Q9UPT8 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
ZC3H4Q9UPT8 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC27.18■■□□□ 1.94
ZC3H4Q9UPT8 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
ZC3H4Q9UPT8 MIR4651-201ENST00000582622 73 ntBASIC27.18■■□□□ 1.94
ZC3H4Q9UPT8 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC27.18■■□□□ 1.94
ZC3H4Q9UPT8 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC27.18■■□□□ 1.94
ZC3H4Q9UPT8 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
ZC3H4Q9UPT8 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
ZC3H4Q9UPT8 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
ZC3H4Q9UPT8 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC27.17■■□□□ 1.94
ZC3H4Q9UPT8 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC27.17■■□□□ 1.94
ZC3H4Q9UPT8 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC27.17■■□□□ 1.94
ZC3H4Q9UPT8 SPI1-203ENST00000533030 661 ntTSL 2 BASIC27.17■■□□□ 1.94
ZC3H4Q9UPT8 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC27.17■■□□□ 1.94
ZC3H4Q9UPT8 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC27.17■■□□□ 1.94
ZC3H4Q9UPT8 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC27.17■■□□□ 1.94
ZC3H4Q9UPT8 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
ZC3H4Q9UPT8 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
ZC3H4Q9UPT8 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC27.17■■□□□ 1.94
ZC3H4Q9UPT8 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC27.17■■□□□ 1.94
ZC3H4Q9UPT8 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
ZC3H4Q9UPT8 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC27.16■■□□□ 1.94
ZC3H4Q9UPT8 SLC7A5P2-201ENST00000553010 536 ntBASIC27.16■■□□□ 1.94
ZC3H4Q9UPT8 RGMA-211ENST00000557420 989 ntTSL 3 BASIC27.16■■□□□ 1.94
ZC3H4Q9UPT8 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
ZC3H4Q9UPT8 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
ZC3H4Q9UPT8 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
ZC3H4Q9UPT8 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC27.16■■□□□ 1.94
ZC3H4Q9UPT8 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
ZC3H4Q9UPT8 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
ZC3H4Q9UPT8 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
ZC3H4Q9UPT8 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
ZC3H4Q9UPT8 AC083906.2-201ENST00000511578 360 ntBASIC27.16■■□□□ 1.94
ZC3H4Q9UPT8 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC27.16■■□□□ 1.94
ZC3H4Q9UPT8 KLF13-207ENST00000560473 489 ntTSL 3 BASIC27.16■■□□□ 1.94
ZC3H4Q9UPT8 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC27.16■■□□□ 1.94
ZC3H4Q9UPT8 AL050303.2-201ENST00000619798 666 ntBASIC27.16■■□□□ 1.94
ZC3H4Q9UPT8 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC27.15■■□□□ 1.94
ZC3H4Q9UPT8 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
ZC3H4Q9UPT8 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC27.15■■□□□ 1.94
ZC3H4Q9UPT8 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC27.15■■□□□ 1.94
ZC3H4Q9UPT8 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC27.15■■□□□ 1.94
ZC3H4Q9UPT8 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC27.15■■□□□ 1.94
ZC3H4Q9UPT8 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
ZC3H4Q9UPT8 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC27.14■■□□□ 1.94
ZC3H4Q9UPT8 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
ZC3H4Q9UPT8 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC27.14■■□□□ 1.93
ZC3H4Q9UPT8 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC27.14■■□□□ 1.93
ZC3H4Q9UPT8 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
ZC3H4Q9UPT8 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
ZC3H4Q9UPT8 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC27.14■■□□□ 1.93
ZC3H4Q9UPT8 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC27.14■■□□□ 1.93
ZC3H4Q9UPT8 ARL16-209ENST00000573715 763 ntTSL 3 BASIC27.14■■□□□ 1.93
ZC3H4Q9UPT8 ARL16-211ENST00000576135 694 ntTSL 3 BASIC27.14■■□□□ 1.93
ZC3H4Q9UPT8 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC27.14■■□□□ 1.93
ZC3H4Q9UPT8 TFG-210ENST00000620299 1289 ntTSL 5 BASIC27.14■■□□□ 1.93
ZC3H4Q9UPT8 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC27.13■■□□□ 1.93
ZC3H4Q9UPT8 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
ZC3H4Q9UPT8 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
ZC3H4Q9UPT8 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
ZC3H4Q9UPT8 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC27.13■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms