Protein–RNA interactions for Protein: Q9P1A2

PPP4R1L, Putative serine/threonine-protein phosphatase 4 regulatory subunit 1-like, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1LQ9P1A2 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.34■□□□□ 0.85
PPP4R1LQ9P1A2 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.33■□□□□ 0.85
PPP4R1LQ9P1A2 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PPP4R1LQ9P1A2 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
PPP4R1LQ9P1A2 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PPP4R1LQ9P1A2 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PPP4R1LQ9P1A2 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.33■□□□□ 0.85
PPP4R1LQ9P1A2 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.85
PPP4R1LQ9P1A2 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
PPP4R1LQ9P1A2 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.33■□□□□ 0.85
PPP4R1LQ9P1A2 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
PPP4R1LQ9P1A2 SERBP1P1-201ENST00000396021 1160 ntBASIC20.33■□□□□ 0.85
PPP4R1LQ9P1A2 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.33■□□□□ 0.85
PPP4R1LQ9P1A2 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.33■□□□□ 0.85
PPP4R1LQ9P1A2 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PPP4R1LQ9P1A2 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.33■□□□□ 0.85
PPP4R1LQ9P1A2 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.33■□□□□ 0.84
PPP4R1LQ9P1A2 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PPP4R1LQ9P1A2 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.33■□□□□ 0.84
PPP4R1LQ9P1A2 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.32■□□□□ 0.84
PPP4R1LQ9P1A2 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
PPP4R1LQ9P1A2 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
PPP4R1LQ9P1A2 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.32■□□□□ 0.84
PPP4R1LQ9P1A2 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PPP4R1LQ9P1A2 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PPP4R1LQ9P1A2 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PPP4R1LQ9P1A2 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PPP4R1LQ9P1A2 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PPP4R1LQ9P1A2 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PPP4R1LQ9P1A2 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
PPP4R1LQ9P1A2 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.32■□□□□ 0.84
PPP4R1LQ9P1A2 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PPP4R1LQ9P1A2 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.31■□□□□ 0.84
PPP4R1LQ9P1A2 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PPP4R1LQ9P1A2 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PPP4R1LQ9P1A2 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
PPP4R1LQ9P1A2 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PPP4R1LQ9P1A2 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
PPP4R1LQ9P1A2 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
PPP4R1LQ9P1A2 MIR3181-201ENST00000578512 73 ntBASIC20.31■□□□□ 0.84
PPP4R1LQ9P1A2 AL138724.1-201ENST00000606771 1088 ntBASIC20.31■□□□□ 0.84
PPP4R1LQ9P1A2 AL136162.1-201ENST00000607711 1078 ntBASIC20.31■□□□□ 0.84
PPP4R1LQ9P1A2 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.31■□□□□ 0.84
PPP4R1LQ9P1A2 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PPP4R1LQ9P1A2 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PPP4R1LQ9P1A2 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.31■□□□□ 0.84
PPP4R1LQ9P1A2 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.31■□□□□ 0.84
PPP4R1LQ9P1A2 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.31■□□□□ 0.84
PPP4R1LQ9P1A2 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.31■□□□□ 0.84
PPP4R1LQ9P1A2 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PPP4R1LQ9P1A2 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.3■□□□□ 0.84
PPP4R1LQ9P1A2 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PPP4R1LQ9P1A2 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PPP4R1LQ9P1A2 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PPP4R1LQ9P1A2 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.3■□□□□ 0.84
PPP4R1LQ9P1A2 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.3■□□□□ 0.84
PPP4R1LQ9P1A2 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PPP4R1LQ9P1A2 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PPP4R1LQ9P1A2 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
PPP4R1LQ9P1A2 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.3■□□□□ 0.84
PPP4R1LQ9P1A2 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PPP4R1LQ9P1A2 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PPP4R1LQ9P1A2 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PPP4R1LQ9P1A2 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PPP4R1LQ9P1A2 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.29■□□□□ 0.84
PPP4R1LQ9P1A2 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PPP4R1LQ9P1A2 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PPP4R1LQ9P1A2 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.29■□□□□ 0.84
PPP4R1LQ9P1A2 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.29■□□□□ 0.84
PPP4R1LQ9P1A2 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PPP4R1LQ9P1A2 AL499627.2-201ENST00000606283 725 ntBASIC20.29■□□□□ 0.84
PPP4R1LQ9P1A2 AC110285.6-201ENST00000617652 491 ntBASIC20.29■□□□□ 0.84
PPP4R1LQ9P1A2 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PPP4R1LQ9P1A2 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PPP4R1LQ9P1A2 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
PPP4R1LQ9P1A2 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PPP4R1LQ9P1A2 AC135279.3-201ENST00000610945 1311 ntBASIC20.28■□□□□ 0.84
PPP4R1LQ9P1A2 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PPP4R1LQ9P1A2 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PPP4R1LQ9P1A2 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PPP4R1LQ9P1A2 PBX2P1-201ENST00000493219 1291 ntBASIC20.28■□□□□ 0.84
PPP4R1LQ9P1A2 AL139246.5-201ENST00000606645 996 ntBASIC20.28■□□□□ 0.84
PPP4R1LQ9P1A2 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
PPP4R1LQ9P1A2 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
PPP4R1LQ9P1A2 AC011298.3-201ENST00000615796 283 ntBASIC20.28■□□□□ 0.84
PPP4R1LQ9P1A2 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PPP4R1LQ9P1A2 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.28■□□□□ 0.84
PPP4R1LQ9P1A2 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
PPP4R1LQ9P1A2 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
PPP4R1LQ9P1A2 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PPP4R1LQ9P1A2 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PPP4R1LQ9P1A2 DUSP8P5-201ENST00000422884 1815 ntBASIC20.27■□□□□ 0.84
PPP4R1LQ9P1A2 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PPP4R1LQ9P1A2 DUSP8P3-201ENST00000399571 1760 ntBASIC20.27■□□□□ 0.84
PPP4R1LQ9P1A2 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PPP4R1LQ9P1A2 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PPP4R1LQ9P1A2 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PPP4R1LQ9P1A2 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PPP4R1LQ9P1A2 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.27■□□□□ 0.84
PPP4R1LQ9P1A2 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms