Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
ATP6V0A4Q9HBG4 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
ATP6V0A4Q9HBG4 AL499627.2-201ENST00000606283 725 ntBASIC24.74■■□□□ 1.55
ATP6V0A4Q9HBG4 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
ATP6V0A4Q9HBG4 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC24.74■■□□□ 1.55
ATP6V0A4Q9HBG4 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC24.74■■□□□ 1.55
ATP6V0A4Q9HBG4 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
ATP6V0A4Q9HBG4 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC24.73■■□□□ 1.55
ATP6V0A4Q9HBG4 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
ATP6V0A4Q9HBG4 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
ATP6V0A4Q9HBG4 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
ATP6V0A4Q9HBG4 RASA4CP-201ENST00000424092 1398 ntBASIC24.73■■□□□ 1.55
ATP6V0A4Q9HBG4 RBM38-205ENST00000440234 686 ntTSL 2 BASIC24.73■■□□□ 1.55
ATP6V0A4Q9HBG4 MAG-206ENST00000597035 542 ntTSL 4 BASIC24.73■■□□□ 1.55
ATP6V0A4Q9HBG4 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC24.73■■□□□ 1.55
ATP6V0A4Q9HBG4 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC24.73■■□□□ 1.55
ATP6V0A4Q9HBG4 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC24.72■■□□□ 1.55
ATP6V0A4Q9HBG4 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
ATP6V0A4Q9HBG4 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
ATP6V0A4Q9HBG4 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
ATP6V0A4Q9HBG4 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
ATP6V0A4Q9HBG4 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC24.72■■□□□ 1.55
ATP6V0A4Q9HBG4 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
ATP6V0A4Q9HBG4 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC24.72■■□□□ 1.55
ATP6V0A4Q9HBG4 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
ATP6V0A4Q9HBG4 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
ATP6V0A4Q9HBG4 CA15P2-201ENST00000611168 834 ntBASIC24.72■■□□□ 1.55
ATP6V0A4Q9HBG4 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
ATP6V0A4Q9HBG4 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
ATP6V0A4Q9HBG4 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
ATP6V0A4Q9HBG4 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
ATP6V0A4Q9HBG4 ANOS2P-203ENST00000472227 1816 ntBASIC24.71■■□□□ 1.55
ATP6V0A4Q9HBG4 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
ATP6V0A4Q9HBG4 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC24.71■■□□□ 1.55
ATP6V0A4Q9HBG4 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC24.71■■□□□ 1.55
ATP6V0A4Q9HBG4 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC24.71■■□□□ 1.55
ATP6V0A4Q9HBG4 MIR5787-201ENST00000611784 55 ntBASIC24.71■■□□□ 1.55
ATP6V0A4Q9HBG4 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC24.71■■□□□ 1.55
ATP6V0A4Q9HBG4 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC24.71■■□□□ 1.55
ATP6V0A4Q9HBG4 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
ATP6V0A4Q9HBG4 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC24.7■■□□□ 1.55
ATP6V0A4Q9HBG4 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.55
ATP6V0A4Q9HBG4 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC24.7■■□□□ 1.54
ATP6V0A4Q9HBG4 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
ATP6V0A4Q9HBG4 AC027682.1-201ENST00000562846 899 ntBASIC24.7■■□□□ 1.54
ATP6V0A4Q9HBG4 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.54
ATP6V0A4Q9HBG4 AL353803.4-201ENST00000565882 1934 ntBASIC24.7■■□□□ 1.54
ATP6V0A4Q9HBG4 AC133637.1-201ENST00000624115 1537 ntBASIC24.7■■□□□ 1.54
ATP6V0A4Q9HBG4 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
ATP6V0A4Q9HBG4 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
ATP6V0A4Q9HBG4 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
ATP6V0A4Q9HBG4 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
ATP6V0A4Q9HBG4 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC24.69■■□□□ 1.54
ATP6V0A4Q9HBG4 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
ATP6V0A4Q9HBG4 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
ATP6V0A4Q9HBG4 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC24.69■■□□□ 1.54
ATP6V0A4Q9HBG4 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC24.69■■□□□ 1.54
ATP6V0A4Q9HBG4 AC008764.7-201ENST00000593779 1081 ntBASIC24.69■■□□□ 1.54
ATP6V0A4Q9HBG4 AC092666.2-201ENST00000613287 246 ntBASIC24.69■■□□□ 1.54
ATP6V0A4Q9HBG4 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
ATP6V0A4Q9HBG4 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
ATP6V0A4Q9HBG4 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
ATP6V0A4Q9HBG4 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
ATP6V0A4Q9HBG4 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
ATP6V0A4Q9HBG4 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
ATP6V0A4Q9HBG4 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
ATP6V0A4Q9HBG4 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC24.68■■□□□ 1.54
ATP6V0A4Q9HBG4 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC24.68■■□□□ 1.54
ATP6V0A4Q9HBG4 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
ATP6V0A4Q9HBG4 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC24.68■■□□□ 1.54
ATP6V0A4Q9HBG4 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC24.67■■□□□ 1.54
ATP6V0A4Q9HBG4 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC24.67■■□□□ 1.54
ATP6V0A4Q9HBG4 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC24.67■■□□□ 1.54
ATP6V0A4Q9HBG4 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
ATP6V0A4Q9HBG4 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC24.67■■□□□ 1.54
ATP6V0A4Q9HBG4 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
ATP6V0A4Q9HBG4 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
ATP6V0A4Q9HBG4 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC24.67■■□□□ 1.54
ATP6V0A4Q9HBG4 AC092068.2-201ENST00000590491 1708 ntBASIC24.66■■□□□ 1.54
ATP6V0A4Q9HBG4 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
ATP6V0A4Q9HBG4 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
ATP6V0A4Q9HBG4 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC24.66■■□□□ 1.54
ATP6V0A4Q9HBG4 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
ATP6V0A4Q9HBG4 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC24.65■■□□□ 1.54
ATP6V0A4Q9HBG4 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC24.65■■□□□ 1.54
ATP6V0A4Q9HBG4 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
ATP6V0A4Q9HBG4 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
ATP6V0A4Q9HBG4 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC24.65■■□□□ 1.54
ATP6V0A4Q9HBG4 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
ATP6V0A4Q9HBG4 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC24.65■■□□□ 1.54
ATP6V0A4Q9HBG4 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC24.65■■□□□ 1.54
ATP6V0A4Q9HBG4 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
ATP6V0A4Q9HBG4 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC24.65■■□□□ 1.54
ATP6V0A4Q9HBG4 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
ATP6V0A4Q9HBG4 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC24.65■■□□□ 1.54
ATP6V0A4Q9HBG4 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
ATP6V0A4Q9HBG4 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.54
ATP6V0A4Q9HBG4 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC24.64■■□□□ 1.54
ATP6V0A4Q9HBG4 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
ATP6V0A4Q9HBG4 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 140 ms