Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.87■□□□□ 0.77
SEC61A2Q9H9S3 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.87■□□□□ 0.77
SEC61A2Q9H9S3 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SEC61A2Q9H9S3 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.87■□□□□ 0.77
SEC61A2Q9H9S3 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SEC61A2Q9H9S3 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
SEC61A2Q9H9S3 AC079834.2-201ENST00000609776 1949 ntBASIC19.86■□□□□ 0.77
SEC61A2Q9H9S3 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
SEC61A2Q9H9S3 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
SEC61A2Q9H9S3 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SEC61A2Q9H9S3 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SEC61A2Q9H9S3 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.86■□□□□ 0.77
SEC61A2Q9H9S3 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.86■□□□□ 0.77
SEC61A2Q9H9S3 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.86■□□□□ 0.77
SEC61A2Q9H9S3 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.86■□□□□ 0.77
SEC61A2Q9H9S3 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.86■□□□□ 0.77
SEC61A2Q9H9S3 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SEC61A2Q9H9S3 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SEC61A2Q9H9S3 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SEC61A2Q9H9S3 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SEC61A2Q9H9S3 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SEC61A2Q9H9S3 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SEC61A2Q9H9S3 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SEC61A2Q9H9S3 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SEC61A2Q9H9S3 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SEC61A2Q9H9S3 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SEC61A2Q9H9S3 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.85■□□□□ 0.77
SEC61A2Q9H9S3 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.85■□□□□ 0.77
SEC61A2Q9H9S3 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.85■□□□□ 0.77
SEC61A2Q9H9S3 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.85■□□□□ 0.77
SEC61A2Q9H9S3 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.85■□□□□ 0.77
SEC61A2Q9H9S3 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
SEC61A2Q9H9S3 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SEC61A2Q9H9S3 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.84■□□□□ 0.77
SEC61A2Q9H9S3 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SEC61A2Q9H9S3 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SEC61A2Q9H9S3 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.84■□□□□ 0.77
SEC61A2Q9H9S3 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SEC61A2Q9H9S3 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.83■□□□□ 0.77
SEC61A2Q9H9S3 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.83■□□□□ 0.77
SEC61A2Q9H9S3 MIR3621-201ENST00000580529 85 ntBASIC19.83■□□□□ 0.77
SEC61A2Q9H9S3 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
SEC61A2Q9H9S3 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.83■□□□□ 0.77
SEC61A2Q9H9S3 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
SEC61A2Q9H9S3 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SEC61A2Q9H9S3 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
SEC61A2Q9H9S3 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
SEC61A2Q9H9S3 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SEC61A2Q9H9S3 CLDN5-201ENST00000403084 2357 ntBASIC19.83■□□□□ 0.76
SEC61A2Q9H9S3 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
SEC61A2Q9H9S3 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
SEC61A2Q9H9S3 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SEC61A2Q9H9S3 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SEC61A2Q9H9S3 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
SEC61A2Q9H9S3 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
SEC61A2Q9H9S3 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SEC61A2Q9H9S3 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.82■□□□□ 0.76
SEC61A2Q9H9S3 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SEC61A2Q9H9S3 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.82■□□□□ 0.76
SEC61A2Q9H9S3 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.82■□□□□ 0.76
SEC61A2Q9H9S3 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.82■□□□□ 0.76
SEC61A2Q9H9S3 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SEC61A2Q9H9S3 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
SEC61A2Q9H9S3 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SEC61A2Q9H9S3 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SEC61A2Q9H9S3 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SEC61A2Q9H9S3 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SEC61A2Q9H9S3 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SEC61A2Q9H9S3 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SEC61A2Q9H9S3 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
SEC61A2Q9H9S3 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SEC61A2Q9H9S3 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.81■□□□□ 0.76
SEC61A2Q9H9S3 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SEC61A2Q9H9S3 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
SEC61A2Q9H9S3 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.81■□□□□ 0.76
SEC61A2Q9H9S3 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.81■□□□□ 0.76
SEC61A2Q9H9S3 AC131281.2-201ENST00000520478 145 ntBASIC19.81■□□□□ 0.76
SEC61A2Q9H9S3 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.81■□□□□ 0.76
SEC61A2Q9H9S3 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SEC61A2Q9H9S3 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SEC61A2Q9H9S3 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.81■□□□□ 0.76
SEC61A2Q9H9S3 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SEC61A2Q9H9S3 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
SEC61A2Q9H9S3 AL353803.4-201ENST00000565882 1934 ntBASIC19.8■□□□□ 0.76
SEC61A2Q9H9S3 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SEC61A2Q9H9S3 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SEC61A2Q9H9S3 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SEC61A2Q9H9S3 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
SEC61A2Q9H9S3 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.8■□□□□ 0.76
SEC61A2Q9H9S3 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SEC61A2Q9H9S3 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.8■□□□□ 0.76
SEC61A2Q9H9S3 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.8■□□□□ 0.76
SEC61A2Q9H9S3 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.8■□□□□ 0.76
SEC61A2Q9H9S3 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SEC61A2Q9H9S3 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.8■□□□□ 0.76
SEC61A2Q9H9S3 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
SEC61A2Q9H9S3 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SEC61A2Q9H9S3 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
SEC61A2Q9H9S3 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SEC61A2Q9H9S3 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms