Protein–RNA interactions for Protein: Q9H7J1

PPP1R3E, Protein phosphatase 1 regulatory subunit 3E, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3EQ9H7J1 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PPP1R3EQ9H7J1 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PPP1R3EQ9H7J1 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.66■□□□□ 0.74
PPP1R3EQ9H7J1 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PPP1R3EQ9H7J1 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.66■□□□□ 0.74
PPP1R3EQ9H7J1 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PPP1R3EQ9H7J1 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PPP1R3EQ9H7J1 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
PPP1R3EQ9H7J1 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
PPP1R3EQ9H7J1 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.65■□□□□ 0.74
PPP1R3EQ9H7J1 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PPP1R3EQ9H7J1 YBX1P4-201ENST00000392794 808 ntBASIC19.65■□□□□ 0.74
PPP1R3EQ9H7J1 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.65■□□□□ 0.74
PPP1R3EQ9H7J1 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.65■□□□□ 0.74
PPP1R3EQ9H7J1 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PPP1R3EQ9H7J1 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.64■□□□□ 0.74
PPP1R3EQ9H7J1 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.64■□□□□ 0.74
PPP1R3EQ9H7J1 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PPP1R3EQ9H7J1 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.64■□□□□ 0.73
PPP1R3EQ9H7J1 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
PPP1R3EQ9H7J1 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.64■□□□□ 0.73
PPP1R3EQ9H7J1 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
PPP1R3EQ9H7J1 AL022069.1-201ENST00000568025 1636 ntBASIC19.64■□□□□ 0.73
PPP1R3EQ9H7J1 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PPP1R3EQ9H7J1 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PPP1R3EQ9H7J1 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.64■□□□□ 0.73
PPP1R3EQ9H7J1 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PPP1R3EQ9H7J1 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
PPP1R3EQ9H7J1 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PPP1R3EQ9H7J1 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PPP1R3EQ9H7J1 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PPP1R3EQ9H7J1 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PPP1R3EQ9H7J1 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PPP1R3EQ9H7J1 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PPP1R3EQ9H7J1 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.63■□□□□ 0.73
PPP1R3EQ9H7J1 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PPP1R3EQ9H7J1 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.63■□□□□ 0.73
PPP1R3EQ9H7J1 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.63■□□□□ 0.73
PPP1R3EQ9H7J1 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.63■□□□□ 0.73
PPP1R3EQ9H7J1 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.62■□□□□ 0.73
PPP1R3EQ9H7J1 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PPP1R3EQ9H7J1 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.62■□□□□ 0.73
PPP1R3EQ9H7J1 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
PPP1R3EQ9H7J1 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PPP1R3EQ9H7J1 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.62■□□□□ 0.73
PPP1R3EQ9H7J1 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PPP1R3EQ9H7J1 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PPP1R3EQ9H7J1 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PPP1R3EQ9H7J1 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
PPP1R3EQ9H7J1 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PPP1R3EQ9H7J1 C11orf96-202ENST00000528572 1834 ntBASIC19.62■□□□□ 0.73
PPP1R3EQ9H7J1 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PPP1R3EQ9H7J1 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PPP1R3EQ9H7J1 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PPP1R3EQ9H7J1 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.62■□□□□ 0.73
PPP1R3EQ9H7J1 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PPP1R3EQ9H7J1 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PPP1R3EQ9H7J1 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
PPP1R3EQ9H7J1 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PPP1R3EQ9H7J1 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PPP1R3EQ9H7J1 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.61■□□□□ 0.73
PPP1R3EQ9H7J1 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.61■□□□□ 0.73
PPP1R3EQ9H7J1 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PPP1R3EQ9H7J1 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
PPP1R3EQ9H7J1 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
PPP1R3EQ9H7J1 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PPP1R3EQ9H7J1 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.6■□□□□ 0.73
PPP1R3EQ9H7J1 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PPP1R3EQ9H7J1 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PPP1R3EQ9H7J1 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PPP1R3EQ9H7J1 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PPP1R3EQ9H7J1 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.6■□□□□ 0.73
PPP1R3EQ9H7J1 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.6■□□□□ 0.73
PPP1R3EQ9H7J1 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.6■□□□□ 0.73
PPP1R3EQ9H7J1 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PPP1R3EQ9H7J1 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.6■□□□□ 0.73
PPP1R3EQ9H7J1 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.6■□□□□ 0.73
PPP1R3EQ9H7J1 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PPP1R3EQ9H7J1 FBXW4P1-201ENST00000426721 2239 ntBASIC19.6■□□□□ 0.73
PPP1R3EQ9H7J1 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.6■□□□□ 0.73
PPP1R3EQ9H7J1 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
PPP1R3EQ9H7J1 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
PPP1R3EQ9H7J1 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.59■□□□□ 0.73
PPP1R3EQ9H7J1 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
PPP1R3EQ9H7J1 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PPP1R3EQ9H7J1 AC139530.1-201ENST00000575312 1977 ntBASIC19.59■□□□□ 0.73
PPP1R3EQ9H7J1 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.59■□□□□ 0.73
PPP1R3EQ9H7J1 RARRES2P1-201ENST00000474487 481 ntBASIC19.59■□□□□ 0.73
PPP1R3EQ9H7J1 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
PPP1R3EQ9H7J1 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PPP1R3EQ9H7J1 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
PPP1R3EQ9H7J1 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PPP1R3EQ9H7J1 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.59■□□□□ 0.73
PPP1R3EQ9H7J1 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PPP1R3EQ9H7J1 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PPP1R3EQ9H7J1 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
PPP1R3EQ9H7J1 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
PPP1R3EQ9H7J1 AL161729.1-201ENST00000604104 1402 ntBASIC19.59■□□□□ 0.73
PPP1R3EQ9H7J1 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PPP1R3EQ9H7J1 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms