Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC26.3■■□□□ 1.8
RNF41Q9H4P4 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC26.3■■□□□ 1.8
RNF41Q9H4P4 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
RNF41Q9H4P4 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
RNF41Q9H4P4 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
RNF41Q9H4P4 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC26.29■■□□□ 1.8
RNF41Q9H4P4 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
RNF41Q9H4P4 AC133561.4-201ENST00000566112 224 ntBASIC26.29■■□□□ 1.8
RNF41Q9H4P4 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
RNF41Q9H4P4 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RNF41Q9H4P4 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
RNF41Q9H4P4 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC26.28■■□□□ 1.8
RNF41Q9H4P4 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
RNF41Q9H4P4 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC26.28■■□□□ 1.8
RNF41Q9H4P4 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RNF41Q9H4P4 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC26.28■■□□□ 1.8
RNF41Q9H4P4 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC26.28■■□□□ 1.8
RNF41Q9H4P4 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC26.28■■□□□ 1.8
RNF41Q9H4P4 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC26.28■■□□□ 1.8
RNF41Q9H4P4 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
RNF41Q9H4P4 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RNF41Q9H4P4 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RNF41Q9H4P4 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC26.27■■□□□ 1.8
RNF41Q9H4P4 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RNF41Q9H4P4 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
RNF41Q9H4P4 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
RNF41Q9H4P4 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC26.26■■□□□ 1.79
RNF41Q9H4P4 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
RNF41Q9H4P4 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC26.26■■□□□ 1.79
RNF41Q9H4P4 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
RNF41Q9H4P4 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC26.26■■□□□ 1.79
RNF41Q9H4P4 MIR4767-201ENST00000582827 78 ntBASIC26.26■■□□□ 1.79
RNF41Q9H4P4 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC26.26■■□□□ 1.79
RNF41Q9H4P4 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
RNF41Q9H4P4 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
RNF41Q9H4P4 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
RNF41Q9H4P4 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RNF41Q9H4P4 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
RNF41Q9H4P4 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
RNF41Q9H4P4 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
RNF41Q9H4P4 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
RNF41Q9H4P4 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
RNF41Q9H4P4 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
RNF41Q9H4P4 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
RNF41Q9H4P4 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
RNF41Q9H4P4 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
RNF41Q9H4P4 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC26.25■■□□□ 1.79
RNF41Q9H4P4 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
RNF41Q9H4P4 DUSP8P5-201ENST00000422884 1815 ntBASIC26.25■■□□□ 1.79
RNF41Q9H4P4 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
RNF41Q9H4P4 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC26.24■■□□□ 1.79
RNF41Q9H4P4 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC26.24■■□□□ 1.79
RNF41Q9H4P4 NFE2L3P1-201ENST00000588207 1959 ntBASIC26.24■■□□□ 1.79
RNF41Q9H4P4 EDA-201ENST00000338901 1233 ntBASIC26.24■■□□□ 1.79
RNF41Q9H4P4 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
RNF41Q9H4P4 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
RNF41Q9H4P4 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC26.24■■□□□ 1.79
RNF41Q9H4P4 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
RNF41Q9H4P4 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RNF41Q9H4P4 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RNF41Q9H4P4 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
RNF41Q9H4P4 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RNF41Q9H4P4 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC26.23■■□□□ 1.79
RNF41Q9H4P4 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
RNF41Q9H4P4 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RNF41Q9H4P4 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC26.23■■□□□ 1.79
RNF41Q9H4P4 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC26.23■■□□□ 1.79
RNF41Q9H4P4 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
RNF41Q9H4P4 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC26.23■■□□□ 1.79
RNF41Q9H4P4 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RNF41Q9H4P4 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RNF41Q9H4P4 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC26.23■■□□□ 1.79
RNF41Q9H4P4 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC26.22■■□□□ 1.79
RNF41Q9H4P4 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC26.22■■□□□ 1.79
RNF41Q9H4P4 MIR638-201ENST00000385237 100 ntBASIC26.22■■□□□ 1.79
RNF41Q9H4P4 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC26.22■■□□□ 1.79
RNF41Q9H4P4 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
RNF41Q9H4P4 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC26.22■■□□□ 1.79
RNF41Q9H4P4 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
RNF41Q9H4P4 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC26.22■■□□□ 1.79
RNF41Q9H4P4 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC26.22■■□□□ 1.79
RNF41Q9H4P4 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC26.21■■□□□ 1.79
RNF41Q9H4P4 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC26.21■■□□□ 1.79
RNF41Q9H4P4 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC26.21■■□□□ 1.79
RNF41Q9H4P4 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
RNF41Q9H4P4 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC26.2■■□□□ 1.79
RNF41Q9H4P4 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
RNF41Q9H4P4 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
RNF41Q9H4P4 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
RNF41Q9H4P4 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
RNF41Q9H4P4 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.78
RNF41Q9H4P4 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
RNF41Q9H4P4 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC26.2■■□□□ 1.78
RNF41Q9H4P4 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC26.2■■□□□ 1.78
RNF41Q9H4P4 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC26.2■■□□□ 1.78
RNF41Q9H4P4 AL355001.2-201ENST00000620617 1191 ntBASIC26.2■■□□□ 1.78
RNF41Q9H4P4 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
RNF41Q9H4P4 AC004687.1-201ENST00000579003 1625 ntBASIC26.2■■□□□ 1.78
RNF41Q9H4P4 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC26.2■■□□□ 1.78
RNF41Q9H4P4 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC26.2■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms