Protein–RNA interactions for Protein: Q9H3E2

SNX25, Sorting nexin-25, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25Q9H3E2 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
SNX25Q9H3E2 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC23.72■■□□□ 1.39
SNX25Q9H3E2 AC142381.2-201ENST00000566120 298 ntBASIC23.72■■□□□ 1.39
SNX25Q9H3E2 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC23.72■■□□□ 1.39
SNX25Q9H3E2 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
SNX25Q9H3E2 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC23.72■■□□□ 1.39
SNX25Q9H3E2 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
SNX25Q9H3E2 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
SNX25Q9H3E2 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
SNX25Q9H3E2 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.71■■□□□ 1.39
SNX25Q9H3E2 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SNX25Q9H3E2 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
SNX25Q9H3E2 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SNX25Q9H3E2 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC23.71■■□□□ 1.39
SNX25Q9H3E2 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC23.71■■□□□ 1.39
SNX25Q9H3E2 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SNX25Q9H3E2 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SNX25Q9H3E2 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SNX25Q9H3E2 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC23.71■■□□□ 1.39
SNX25Q9H3E2 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SNX25Q9H3E2 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SNX25Q9H3E2 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC23.71■■□□□ 1.39
SNX25Q9H3E2 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
SNX25Q9H3E2 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
SNX25Q9H3E2 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SNX25Q9H3E2 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
SNX25Q9H3E2 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC23.7■■□□□ 1.38
SNX25Q9H3E2 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC23.7■■□□□ 1.38
SNX25Q9H3E2 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
SNX25Q9H3E2 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC23.7■■□□□ 1.38
SNX25Q9H3E2 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC23.7■■□□□ 1.38
SNX25Q9H3E2 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC23.7■■□□□ 1.38
SNX25Q9H3E2 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.7■■□□□ 1.38
SNX25Q9H3E2 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC23.7■■□□□ 1.38
SNX25Q9H3E2 AL031432.3-201ENST00000607698 485 ntBASIC23.7■■□□□ 1.38
SNX25Q9H3E2 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
SNX25Q9H3E2 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.7■■□□□ 1.38
SNX25Q9H3E2 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SNX25Q9H3E2 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
SNX25Q9H3E2 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
SNX25Q9H3E2 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
SNX25Q9H3E2 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SNX25Q9H3E2 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC23.69■■□□□ 1.38
SNX25Q9H3E2 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SNX25Q9H3E2 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC23.69■■□□□ 1.38
SNX25Q9H3E2 AC019069.1-201ENST00000610008 1333 ntBASIC23.69■■□□□ 1.38
SNX25Q9H3E2 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SNX25Q9H3E2 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SNX25Q9H3E2 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC23.69■■□□□ 1.38
SNX25Q9H3E2 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC23.69■■□□□ 1.38
SNX25Q9H3E2 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC23.69■■□□□ 1.38
SNX25Q9H3E2 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SNX25Q9H3E2 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SNX25Q9H3E2 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SNX25Q9H3E2 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
SNX25Q9H3E2 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SNX25Q9H3E2 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SNX25Q9H3E2 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SNX25Q9H3E2 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC23.68■■□□□ 1.38
SNX25Q9H3E2 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SNX25Q9H3E2 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC23.68■■□□□ 1.38
SNX25Q9H3E2 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC23.68■■□□□ 1.38
SNX25Q9H3E2 SUDS3P1-201ENST00000505831 966 ntBASIC23.68■■□□□ 1.38
SNX25Q9H3E2 AF213884.3-201ENST00000563833 479 ntBASIC23.68■■□□□ 1.38
SNX25Q9H3E2 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SNX25Q9H3E2 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
SNX25Q9H3E2 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
SNX25Q9H3E2 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
SNX25Q9H3E2 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
SNX25Q9H3E2 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC23.67■■□□□ 1.38
SNX25Q9H3E2 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SNX25Q9H3E2 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
SNX25Q9H3E2 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SNX25Q9H3E2 AP001330.3-201ENST00000520123 633 ntBASIC23.67■■□□□ 1.38
SNX25Q9H3E2 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC23.67■■□□□ 1.38
SNX25Q9H3E2 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC23.67■■□□□ 1.38
SNX25Q9H3E2 AC008764.7-201ENST00000593779 1081 ntBASIC23.67■■□□□ 1.38
SNX25Q9H3E2 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC23.67■■□□□ 1.38
SNX25Q9H3E2 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
SNX25Q9H3E2 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC23.66■■□□□ 1.38
SNX25Q9H3E2 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SNX25Q9H3E2 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
SNX25Q9H3E2 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SNX25Q9H3E2 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SNX25Q9H3E2 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SNX25Q9H3E2 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SNX25Q9H3E2 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
SNX25Q9H3E2 AL136967.2-201ENST00000623968 743 ntBASIC23.65■■□□□ 1.38
SNX25Q9H3E2 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SNX25Q9H3E2 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SNX25Q9H3E2 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SNX25Q9H3E2 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
SNX25Q9H3E2 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SNX25Q9H3E2 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC23.65■■□□□ 1.38
SNX25Q9H3E2 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC23.65■■□□□ 1.38
SNX25Q9H3E2 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SNX25Q9H3E2 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC23.64■■□□□ 1.38
SNX25Q9H3E2 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
SNX25Q9H3E2 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SNX25Q9H3E2 MIR939-201ENST00000401314 82 ntBASIC23.64■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms