Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC18.74■□□□□ 0.59
ALX4Q9H161 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.74■□□□□ 0.59
ALX4Q9H161 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ALX4Q9H161 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
ALX4Q9H161 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
ALX4Q9H161 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
ALX4Q9H161 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.73■□□□□ 0.59
ALX4Q9H161 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ALX4Q9H161 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ALX4Q9H161 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.73■□□□□ 0.59
ALX4Q9H161 AC079630.1-202ENST00000618127 1840 ntBASIC18.73■□□□□ 0.59
ALX4Q9H161 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC18.73■□□□□ 0.59
ALX4Q9H161 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
ALX4Q9H161 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ALX4Q9H161 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ALX4Q9H161 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
ALX4Q9H161 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ALX4Q9H161 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.72■□□□□ 0.59
ALX4Q9H161 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ALX4Q9H161 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ALX4Q9H161 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ALX4Q9H161 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ALX4Q9H161 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
ALX4Q9H161 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ALX4Q9H161 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ALX4Q9H161 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
ALX4Q9H161 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC18.72■□□□□ 0.59
ALX4Q9H161 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ALX4Q9H161 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ALX4Q9H161 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
ALX4Q9H161 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ALX4Q9H161 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
ALX4Q9H161 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC18.72■□□□□ 0.59
ALX4Q9H161 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
ALX4Q9H161 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
ALX4Q9H161 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ALX4Q9H161 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ALX4Q9H161 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.71■□□□□ 0.59
ALX4Q9H161 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ALX4Q9H161 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ALX4Q9H161 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
ALX4Q9H161 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ALX4Q9H161 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
ALX4Q9H161 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
ALX4Q9H161 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC18.71■□□□□ 0.59
ALX4Q9H161 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ALX4Q9H161 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ALX4Q9H161 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
ALX4Q9H161 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.71■□□□□ 0.59
ALX4Q9H161 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.71■□□□□ 0.59
ALX4Q9H161 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ALX4Q9H161 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.71■□□□□ 0.58
ALX4Q9H161 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
ALX4Q9H161 AL022069.1-201ENST00000568025 1636 ntBASIC18.71■□□□□ 0.58
ALX4Q9H161 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ALX4Q9H161 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
ALX4Q9H161 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ALX4Q9H161 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC18.7■□□□□ 0.58
ALX4Q9H161 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ALX4Q9H161 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ALX4Q9H161 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ALX4Q9H161 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC18.7■□□□□ 0.58
ALX4Q9H161 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ALX4Q9H161 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
ALX4Q9H161 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ALX4Q9H161 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ALX4Q9H161 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ALX4Q9H161 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.7■□□□□ 0.58
ALX4Q9H161 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.69■□□□□ 0.58
ALX4Q9H161 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
ALX4Q9H161 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ALX4Q9H161 AC073130.3-201ENST00000624389 2278 ntBASIC18.69■□□□□ 0.58
ALX4Q9H161 GUK1-208ENST00000366728 842 ntTSL 2 BASIC18.69■□□□□ 0.58
ALX4Q9H161 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC18.69■□□□□ 0.58
ALX4Q9H161 AC080038.3-201ENST00000623346 1952 ntBASIC18.69■□□□□ 0.58
ALX4Q9H161 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
ALX4Q9H161 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
ALX4Q9H161 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ALX4Q9H161 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ALX4Q9H161 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ALX4Q9H161 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
ALX4Q9H161 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
ALX4Q9H161 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
ALX4Q9H161 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ALX4Q9H161 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.68■□□□□ 0.58
ALX4Q9H161 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ALX4Q9H161 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ALX4Q9H161 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC18.68■□□□□ 0.58
ALX4Q9H161 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.68■□□□□ 0.58
ALX4Q9H161 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
ALX4Q9H161 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC18.68■□□□□ 0.58
ALX4Q9H161 AC018755.3-202ENST00000596210 929 ntBASIC18.68■□□□□ 0.58
ALX4Q9H161 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ALX4Q9H161 ALDH1A3-203ENST00000557963 1670 ntBASIC18.68■□□□□ 0.58
ALX4Q9H161 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ALX4Q9H161 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
ALX4Q9H161 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.68■□□□□ 0.58
ALX4Q9H161 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ALX4Q9H161 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ALX4Q9H161 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms