Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HDHD3Q9BSH5 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.73■□□□□ 0.59
HDHD3Q9BSH5 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HDHD3Q9BSH5 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HDHD3Q9BSH5 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HDHD3Q9BSH5 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
HDHD3Q9BSH5 GUK1-208ENST00000366728 842 ntTSL 2 BASIC18.73■□□□□ 0.59
HDHD3Q9BSH5 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC18.73■□□□□ 0.59
HDHD3Q9BSH5 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC18.73■□□□□ 0.59
HDHD3Q9BSH5 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HDHD3Q9BSH5 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HDHD3Q9BSH5 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HDHD3Q9BSH5 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.73■□□□□ 0.59
HDHD3Q9BSH5 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
HDHD3Q9BSH5 AC139530.1-201ENST00000575312 1977 ntBASIC18.73■□□□□ 0.59
HDHD3Q9BSH5 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
HDHD3Q9BSH5 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HDHD3Q9BSH5 AC137767.1-201ENST00000602918 1920 ntBASIC18.72■□□□□ 0.59
HDHD3Q9BSH5 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
HDHD3Q9BSH5 AC080038.3-201ENST00000623346 1952 ntBASIC18.72■□□□□ 0.59
HDHD3Q9BSH5 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HDHD3Q9BSH5 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HDHD3Q9BSH5 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HDHD3Q9BSH5 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC18.72■□□□□ 0.59
HDHD3Q9BSH5 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HDHD3Q9BSH5 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HDHD3Q9BSH5 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
HDHD3Q9BSH5 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC18.72■□□□□ 0.59
HDHD3Q9BSH5 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC18.72■□□□□ 0.59
HDHD3Q9BSH5 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HDHD3Q9BSH5 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HDHD3Q9BSH5 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HDHD3Q9BSH5 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.71■□□□□ 0.59
HDHD3Q9BSH5 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
HDHD3Q9BSH5 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HDHD3Q9BSH5 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HDHD3Q9BSH5 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
HDHD3Q9BSH5 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HDHD3Q9BSH5 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.71■□□□□ 0.59
HDHD3Q9BSH5 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
HDHD3Q9BSH5 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC18.71■□□□□ 0.59
HDHD3Q9BSH5 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HDHD3Q9BSH5 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
HDHD3Q9BSH5 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
HDHD3Q9BSH5 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
HDHD3Q9BSH5 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HDHD3Q9BSH5 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.58
HDHD3Q9BSH5 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.58
HDHD3Q9BSH5 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HDHD3Q9BSH5 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
HDHD3Q9BSH5 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
HDHD3Q9BSH5 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HDHD3Q9BSH5 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
HDHD3Q9BSH5 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18.7■□□□□ 0.58
HDHD3Q9BSH5 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
HDHD3Q9BSH5 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC18.7■□□□□ 0.58
HDHD3Q9BSH5 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
HDHD3Q9BSH5 LSM7-203ENST00000585409 512 ntTSL 2 BASIC18.7■□□□□ 0.58
HDHD3Q9BSH5 SNX5-217ENST00000606557 1087 ntBASIC18.7■□□□□ 0.58
HDHD3Q9BSH5 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.7■□□□□ 0.58
HDHD3Q9BSH5 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HDHD3Q9BSH5 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HDHD3Q9BSH5 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
HDHD3Q9BSH5 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
HDHD3Q9BSH5 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HDHD3Q9BSH5 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
HDHD3Q9BSH5 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HDHD3Q9BSH5 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HDHD3Q9BSH5 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.69■□□□□ 0.58
HDHD3Q9BSH5 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.69■□□□□ 0.58
HDHD3Q9BSH5 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HDHD3Q9BSH5 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HDHD3Q9BSH5 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
HDHD3Q9BSH5 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HDHD3Q9BSH5 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC18.69■□□□□ 0.58
HDHD3Q9BSH5 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HDHD3Q9BSH5 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
HDHD3Q9BSH5 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HDHD3Q9BSH5 KRT8P33-201ENST00000508125 1423 ntBASIC18.68■□□□□ 0.58
HDHD3Q9BSH5 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HDHD3Q9BSH5 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.68■□□□□ 0.58
HDHD3Q9BSH5 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HDHD3Q9BSH5 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.68■□□□□ 0.58
HDHD3Q9BSH5 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HDHD3Q9BSH5 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC18.68■□□□□ 0.58
HDHD3Q9BSH5 AC103834.1-201ENST00000520383 144 ntBASIC18.68■□□□□ 0.58
HDHD3Q9BSH5 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC18.68■□□□□ 0.58
HDHD3Q9BSH5 MIR4508-201ENST00000584178 70 ntBASIC18.68■□□□□ 0.58
HDHD3Q9BSH5 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HDHD3Q9BSH5 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.68■□□□□ 0.58
HDHD3Q9BSH5 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HDHD3Q9BSH5 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HDHD3Q9BSH5 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HDHD3Q9BSH5 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HDHD3Q9BSH5 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.67■□□□□ 0.58
HDHD3Q9BSH5 AC144652.1-201ENST00000609974 1624 ntBASIC18.67■□□□□ 0.58
HDHD3Q9BSH5 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
HDHD3Q9BSH5 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HDHD3Q9BSH5 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HDHD3Q9BSH5 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms